hbctraining / Intro-to-scRNAseqLinks
☆645Updated 3 weeks ago
Alternatives and similar repositories for Intro-to-scRNAseq
Users that are interested in Intro-to-scRNAseq are comparing it to the libraries listed below
Sorting:
- ☆602Updated 4 years ago
- A list of scRNA-seq analysis tools☆773Updated last month
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆623Updated 2 months ago
- R package for detecting doublets in single-cell RNA sequencing data☆523Updated 10 months ago
- Inferring CNV from Single-Cell RNA-Seq☆650Updated 2 months ago
- NicheNet: predict active ligand-target links between interacting cells☆614Updated 2 months ago
- scripts and notebooks from sanbomics☆463Updated last year
- Analysis of single cell RNA-seq data course☆678Updated 3 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆535Updated 4 months ago
- Collections of library structure and sequence of popular single cell genomic methods☆491Updated 8 months ago
- ChIP-seq analysis notes from Ming Tang☆839Updated last year
- pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which…☆573Updated 7 months ago
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆445Updated 11 months ago
- scRNAseq analysis notes from Ming Tang☆773Updated last year
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆520Updated last month
- ☆437Updated last month
- ☆408Updated 4 years ago
- A repository for setting up a RNAseq workflow☆451Updated 8 years ago
- RNAseq analysis notes from Ming Tang☆1,068Updated 4 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆760Updated 2 years ago
- SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.☆478Updated last year
- RNA Velocity generalized through dynamical modeling☆486Updated last month
- Fast, sensitive and accurate integration of single-cell data with Harmony☆619Updated 3 months ago
- R toolkit for the analysis of single-cell chromatin data☆403Updated 2 weeks ago
- Community-provided extensions to Seurat☆355Updated last week
- ENCODE ATAC-seq pipeline☆446Updated last year
- ☆358Updated 4 years ago
- Tutorial for scRNA-seq data analysis beginners using R☆241Updated 11 months ago
- Analysis of single cell RNA-seq data course☆163Updated 3 years ago
- Intro to ChIPseq using HPC☆320Updated 3 years ago