hbctraining / Intro-to-scRNAseqLinks
☆639Updated last month
Alternatives and similar repositories for Intro-to-scRNAseq
Users that are interested in Intro-to-scRNAseq are comparing it to the libraries listed below
Sorting:
- ☆598Updated 4 years ago
- A list of scRNA-seq analysis tools☆768Updated this week
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆610Updated last month
- R package for detecting doublets in single-cell RNA sequencing data☆517Updated 9 months ago
- Inferring CNV from Single-Cell RNA-Seq☆646Updated last month
- NicheNet: predict active ligand-target links between interacting cells☆601Updated last month
- Analysis of single cell RNA-seq data course☆678Updated 3 years ago
- scripts and notebooks from sanbomics☆456Updated last year
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆516Updated 3 months ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆513Updated this week
- ChIP-seq analysis notes from Ming Tang☆836Updated last year
- pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which…☆567Updated 6 months ago
- Collections of library structure and sequence of popular single cell genomic methods☆488Updated 7 months ago
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆442Updated 10 months ago
- SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.☆475Updated last year
- ☆429Updated this week
- ☆407Updated 3 years ago
- RNAseq analysis notes from Ming Tang☆1,059Updated 4 years ago
- Intro to ChIPseq using HPC☆320Updated 2 years ago
- ENCODE ATAC-seq pipeline☆443Updated last year
- Community-provided extensions to Seurat☆353Updated this week
- scRNAseq analysis notes from Ming Tang☆771Updated last year
- Analysis of single cell RNA-seq data course☆161Updated 3 years ago
- RNA Velocity generalized through dynamical modeling☆482Updated 2 weeks ago
- ☆358Updated 4 years ago
- A package to help convert different single-cell data formats to each other☆451Updated last year
- R toolkit for the analysis of single-cell chromatin data☆398Updated last month
- Fast, sensitive and accurate integration of single-cell data with Harmony☆617Updated 3 months ago
- ☆365Updated last year
- Papers with code for single cell related papers☆299Updated 2 years ago