☆660Jun 18, 2026Updated last week
Alternatives and similar repositories for Intro-to-scRNAseq
Users that are interested in Intro-to-scRNAseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A list of scRNA-seq analysis tools☆802Updated this week
- ☆611Mar 23, 2021Updated 5 years ago
- ☆218May 28, 2026Updated last month
- R package for detecting doublets in single-cell RNA sequencing data☆552Mar 21, 2025Updated last year
- Single cell RNA sequencing analysis course☆244Apr 27, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆93Apr 15, 2026Updated 2 months ago
- Tutorial for scRNA-seq data analysis beginners using R☆269Mar 5, 2025Updated last year
- scRNAseq analysis notes from Ming Tang☆813Dec 2, 2024Updated last year
- Community-provided extensions to Seurat☆365Feb 17, 2026Updated 4 months ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,763Jun 22, 2026Updated last week
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,573Dec 11, 2022Updated 3 years ago
- https://www.sc-best-practices.org☆1,219Jun 23, 2026Updated last week
- A toolkit for single-cell immune profiling☆371Updated this week
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆330Nov 1, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆302Updated this week
- NicheNet: predict active ligand-target links between interacting cells☆661Jun 1, 2026Updated 3 weeks ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆791Jan 6, 2024Updated 2 years ago
- Easy single cell analysis platform for enrichment☆227Apr 3, 2026Updated 2 months ago
- Introduction to bulk RNA-seq☆147Mar 16, 2026Updated 3 months ago
- R toolkit for single cell genomics☆2,757Updated this week
- Analysis of single cell RNA-seq data course☆681Apr 11, 2022Updated 4 years ago
- Methods for detecting doublets in single-cell sequencing data☆254Jun 23, 2026Updated last week
- Papers with code for single cell related papers☆314Mar 23, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- High dimensional weighted gene co-expression network analysis☆481Jun 16, 2026Updated 2 weeks ago
- ☆101Mar 16, 2026Updated 3 months ago
- A package to help convert different single-cell data formats to each other☆470Feb 20, 2026Updated 4 months ago
- ☆56Mar 16, 2026Updated 3 months ago
- ☆184May 4, 2026Updated last month
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆653Mar 11, 2026Updated 3 months ago
- ☆33Jul 17, 2021Updated 4 years ago
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆241May 8, 2023Updated 3 years ago
- Analysis of single cell RNA-seq data course☆170Aug 8, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Inferring CNV from Single-Cell RNA-Seq☆675Nov 14, 2025Updated 7 months ago
- ChIP-seq analysis notes from Ming Tang☆849Aug 5, 2024Updated last year
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆339Apr 23, 2024Updated 2 years ago
- R package to infer biological activities from omics data using a collection of methods.☆300Dec 16, 2025Updated 6 months ago
- R package for integrating and analyzing multiple single-cell datasets☆431Feb 4, 2026Updated 4 months ago
- ☆113Sep 16, 2020Updated 5 years ago
- A tool for semi-automatic cell type classification☆491May 22, 2026Updated last month