hbctraining / Intro-to-scRNAseqLinks
☆621Updated 5 months ago
Alternatives and similar repositories for Intro-to-scRNAseq
Users that are interested in Intro-to-scRNAseq are comparing it to the libraries listed below
Sorting:
- ☆579Updated 4 years ago
- A list of scRNA-seq analysis tools☆733Updated this week
- Inferring CNV from Single-Cell RNA-Seq☆635Updated 7 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆556Updated last year
- R package for detecting doublets in single-cell RNA sequencing data☆491Updated 5 months ago
- NicheNet: predict active ligand-target links between interacting cells☆561Updated last month
- scripts and notebooks from sanbomics☆440Updated 9 months ago
- Analysis of single cell RNA-seq data course☆675Updated 3 years ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆500Updated 2 weeks ago
- Collections of library structure and sequence of popular single cell genomic methods☆477Updated 3 months ago
- ChIP-seq analysis notes from Ming Tang☆818Updated last year
- pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which…☆536Updated 2 months ago
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆431Updated 6 months ago
- SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.☆466Updated last year
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆456Updated 2 weeks ago
- scRNAseq analysis notes from Ming Tang☆736Updated 9 months ago
- ☆396Updated 3 years ago
- Intro to ChIPseq using HPC☆311Updated 2 years ago
- ☆404Updated 2 months ago
- ENCODE ATAC-seq pipeline☆427Updated last year
- A package to help convert different single-cell data formats to each other☆438Updated last year
- Fast, sensitive and accurate integration of single-cell data with Harmony☆598Updated 10 months ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆728Updated last year
- Analysis of single cell RNA-seq data course☆146Updated 3 years ago
- A repository for setting up a RNAseq workflow☆442Updated 8 years ago
- Community-provided extensions to Seurat☆344Updated 9 months ago
- Papers with code for single cell related papers☆293Updated 2 years ago
- R toolkit for the analysis of single-cell chromatin data☆388Updated last week
- RNAseq analysis notes from Ming Tang☆1,031Updated 3 years ago
- 10x Genomics Single Cell Analysis☆428Updated 7 months ago