Dragonlongzhilin / RenalTumor
Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
☆77Updated 4 months ago
Alternatives and similar repositories for RenalTumor:
Users that are interested in RenalTumor are comparing it to the libraries listed below
- ☆45Updated 3 years ago
- Codes used in pan-T cell analysis☆54Updated 2 years ago
- ☆39Updated 7 months ago
- The integration of single cell rank-based gene set enrichment analysis☆121Updated 7 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆45Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆96Updated last year
- ☆30Updated 2 years ago
- ☆29Updated last year
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆39Updated last year
- ☆101Updated 4 years ago
- Reanalyze of GSE111527 scRNA-seq data☆19Updated 4 years ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆93Updated 3 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last year
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆74Updated 5 months ago
- ☆31Updated last year
- collected resource for scRNA-seq analysis☆58Updated last year
- ☆64Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆41Updated 4 months ago
- Codes for the scPLC project☆63Updated 2 years ago
- A R package for advanced single cell data viz☆65Updated last year
- Visualize the results of cell-cell communication analysis☆20Updated 2 years ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆98Updated 6 months ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆78Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- ☆14Updated last year
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆71Updated 4 months ago
- ☆104Updated 2 weeks ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆98Updated last week
- Create stacked violin plot☆46Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year