scRNAseq analysis notes from Ming Tang
☆821Dec 2, 2024Updated last year
Alternatives and similar repositories for scRNAseq-analysis-notes
Users that are interested in scRNAseq-analysis-notes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A list of scRNA-seq analysis tools☆808Jul 14, 2026Updated last week
- RNAseq analysis notes from Ming Tang☆1,093Nov 15, 2021Updated 4 years ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,808Jul 14, 2026Updated last week
- Unix, R and python tools for genomics and data science☆1,402Aug 25, 2025Updated 10 months ago
- my notes for scATACseq analysis☆133Apr 24, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,578Dec 11, 2022Updated 3 years ago
- ChIP-seq analysis notes from Ming Tang☆852Aug 5, 2024Updated last year
- T/B cell receptor sequencing analysis notes☆279Dec 1, 2024Updated last year
- tools and notes for spatial omics☆367Feb 26, 2025Updated last year
- Table of software for the analysis of single-cell RNA-seq data.☆341Updated this week
- Analysis of single cell RNA-seq data course☆682Apr 11, 2022Updated 4 years ago
- Interpretation of cell states using reference single-cell maps☆323Dec 19, 2025Updated 7 months ago
- Harvard FAS informatics scRNAseq workshop website☆39Aug 8, 2019Updated 6 years ago
- published papers with a lot of data☆75Apr 5, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆226Mar 2, 2026Updated 4 months ago
- ☆661Jul 14, 2026Updated last week
- https://www.sc-best-practices.org☆1,226Updated this week
- ☆92Dec 1, 2024Updated last year
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆335Nov 1, 2022Updated 3 years ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆304Jun 30, 2026Updated 2 weeks ago
- A package to help convert different single-cell data formats to each other☆473Feb 20, 2026Updated 5 months ago
- Easy single cell analysis platform for enrichment☆228Apr 3, 2026Updated 3 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆661Mar 11, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆229Jul 2, 2026Updated 2 weeks ago
- A toolkit for single-cell immune profiling☆372Jul 9, 2026Updated last week
- R package implementation of Milo for testing for differential abundance in KNN graphs☆439May 11, 2026Updated 2 months ago
- Single-cell Transcriptome and Regulome Analysis Pipeline☆312Mar 6, 2023Updated 3 years ago
- Single RNA-seq data analysis with R (Finland, May, 2019)☆231Aug 1, 2022Updated 3 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆94Aug 26, 2020Updated 5 years ago
- An overview of algorithms for estimating pseudotime in single-cell RNA-seq data☆443Apr 28, 2026Updated 2 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆115Dec 18, 2025Updated 7 months ago
- R/Bioconductor package for working with 10x scATACseq data☆42Nov 13, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A tool for semi-automatic cell type classification☆496May 22, 2026Updated last month
- R toolkit for single cell genomics☆2,770Jul 14, 2026Updated last week
- List of software packages for multi-omics analysis☆936Updated this week
- Multi-sample multi-group scRNA-seq analysis tools☆237Jul 6, 2026Updated 2 weeks ago
- Bioinformatics one liners from Ming Tang☆501Oct 4, 2020Updated 5 years ago
- R package for pathway analysis in scRNA-seq data☆82Aug 17, 2024Updated last year
- R package for integrating and analyzing multiple single-cell datasets☆431Feb 4, 2026Updated 5 months ago