metadata and data from the database
☆43Jan 29, 2020Updated 6 years ago
Alternatives and similar repositories for PanglaoDB
Users that are interested in PanglaoDB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- analysis of single cell RNA sequencing data and cell type annotation☆19Jan 2, 2020Updated 6 years ago
- Regulatory networks with Direct Information in python☆42Mar 9, 2023Updated 3 years ago
- Scripts to create cartoons of 3D genomes☆12Feb 27, 2024Updated 2 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- PAST: a Prior-based self-Attention method for Spatial Transcriptomics☆13Mar 1, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pathway-based trajectory inference method for time-series scRNAseq data☆26May 18, 2021Updated 5 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆15Aug 10, 2022Updated 4 years ago
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆19Jun 25, 2020Updated 6 years ago
- Pipeline for harmonising immunological receptor–epitope interactions☆17Sep 2, 2026Updated 2 weeks ago
- Imputation of single cell RNA-sequencing data with autoencoder☆16Jun 23, 2021Updated 5 years ago
- Store collections of experimental data based on TileDB☆11Updated this week
- Interactive visulizations for track-based genomic data in R☆15Sep 9, 2024Updated 2 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Short course using RStudio for biological data analysis☆14Jul 7, 2022Updated 4 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48May 23, 2020Updated 6 years ago
- Exon-Intron Split Analysis (EISA) in R☆18Aug 27, 2026Updated 3 weeks ago
- nimfa - A Python Library for Nonnegative Matrix Factorization Techniques☆10Aug 30, 2018Updated 8 years ago
- ☆26May 8, 2026Updated 4 months ago
- ☆44Oct 20, 2023Updated 2 years ago
- Bench-marking classification tools for scRNA-seq data☆196Jun 9, 2022Updated 4 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆24Apr 19, 2021Updated 5 years ago
- Batch balanced KNN☆180Oct 11, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Jan 7, 2020Updated 6 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 6 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 7 years ago
- main repo: https://github.com/ucscGenomeBrowser/cellBrowser/ - Python pipeline and Javascript scatter plot library for single-cell datase…☆114Jan 20, 2023Updated 3 years ago
- ClusterMap is an R package to analyze and compare two or more single cell expression datasets.☆22Jan 17, 2023Updated 3 years ago
- ☆65Mar 18, 2025Updated last year
- ☆68Sep 13, 2024Updated 2 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆107Aug 2, 2023Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47May 3, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆20Aug 28, 2026Updated 3 weeks ago
- Identify cell type based on cell markers for single cell squencing☆12Jul 10, 2024Updated 2 years ago
- Fast array utilities☆15Updated this week
- Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.☆15Mar 22, 2022Updated 4 years ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆30Nov 29, 2019Updated 6 years ago
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 6 years ago
- Tools for working with BUS files☆102May 27, 2025Updated last year