bpucker / RNA-Seq_analysis
scripts for RNA-Seq analysis
☆26Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for RNA-Seq_analysis
- RNA editing quantification in deep transcriptome data☆15Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated last year
- ☆17Updated 6 months ago
- ☆16Updated 3 months ago
- ☆24Updated 2 years ago
- ☆33Updated 2 months ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆19Updated 5 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆26Updated last year
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆18Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆45Updated 10 months ago
- ☆23Updated 3 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆20Updated 2 years ago
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆27Updated last month
- New version of JACUSA -> 2.0☆23Updated 3 weeks ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆34Updated 4 months ago
- visual analysis of your VCF files☆25Updated last year
- Benchmarking long-read RNA-seq analysis tools☆25Updated 9 months ago
- Long-read Isoform Quantification and Analysis☆39Updated 3 months ago
- ☆33Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆32Updated 3 years ago
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆12Updated last year
- microRNA PREdiction From small RNA-seq data☆29Updated 6 years ago
- SingleCell Nanopore sequencing data analysis☆52Updated 2 weeks ago
- ☆14Updated 2 years ago
- Long read to rMATS☆31Updated last year
- ☆53Updated 3 years ago
- Interactive multiscale visualization for structural variation in human genomes☆64Updated last week
- Readme☆10Updated 4 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆36Updated 3 weeks ago