☆12Aug 30, 2025Updated 6 months ago
Alternatives and similar repositories for sceodesic
Users that are interested in sceodesic are comparing it to the libraries listed below
Sorting:
- Store collections of experimental data based on TileDB☆12Feb 23, 2026Updated last week
- A python package for chromVAR☆33May 1, 2023Updated 2 years ago
- Parse ArchR arrow files to anndata h5ad☆16Dec 14, 2023Updated 2 years ago
- AnnData interoperability in R☆158Updated this week
- ☆27Oct 23, 2024Updated last year
- Scripts and files for the annual Short Read Analysis Workshop☆12Jul 21, 2025Updated 7 months ago
- Imperial College London / Graduate School / Data Science / Data Exploration & Visualisation☆10Apr 17, 2024Updated last year
- Joint Trajectory Inference for Single-cell Genomics Using Deep Learning with a Mixture Prior☆32Mar 14, 2025Updated 11 months ago
- a dataloader to work with large single cell datasets from lamindb☆36Feb 19, 2026Updated 2 weeks ago
- A method for analyzing scATAC-seq experiments.☆34Jun 20, 2025Updated 8 months ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 4 months ago
- iterative clustering pipeline of big single cell datasets.☆36Sep 5, 2025Updated 6 months ago
- Copenhagen brain entropy toolbox - a set of matlab tools to compute entropy measures in neuroimaging data☆10Updated this week
- ☆11Oct 10, 2024Updated last year
- An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal☆14Feb 5, 2026Updated last month
- Visualize and print volumetric brain data☆13Jun 20, 2024Updated last year
- R package for specialised analysis of single cell data☆41Oct 14, 2022Updated 3 years ago
- metadata and data from the database☆42Jan 29, 2020Updated 6 years ago
- find clusters of different intrinsic dimension☆11Feb 16, 2024Updated 2 years ago
- Single cell Morphology Quality Control (coSMicQC)☆10Updated this week
- Precursor microRNA Identification Using Deep Convolutional Neural Networks☆11Oct 31, 2018Updated 7 years ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Mar 3, 2023Updated 3 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Oct 15, 2025Updated 4 months ago
- A tutorial on NMFreg applied to cerebellum data.☆12Apr 7, 2020Updated 5 years ago
- python script to programmatically enrich your data using Enrichr API☆12Jul 5, 2017Updated 8 years ago
- Data and scripts for 'Human Brain Effects of DMT assesed via EEG-fMRI'☆12Jan 25, 2023Updated 3 years ago
- brainglobe.info website☆13Feb 27, 2026Updated last week
- Code of the paper "DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images"☆12May 10, 2025Updated 9 months ago
- A machine learning library focused on deep learning☆11Jun 2, 2015Updated 10 years ago
- Extended ComplexHeatmap☆11Jan 5, 2025Updated last year
- Slurm Examples☆10Aug 30, 2024Updated last year
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Astronomy packages for R, Python, and Julia☆11Jul 7, 2024Updated last year
- ☆10Jan 8, 2018Updated 8 years ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 3 months ago
- A curated list of awesome Molecular Modeling And Drug Discovery 🔥☆11Jul 21, 2022Updated 3 years ago
- ☆13Oct 29, 2021Updated 4 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year