Short course using RStudio for biological data analysis
☆14Jul 7, 2022Updated 4 years ago
Alternatives and similar repositories for practical-data-analysis
Users that are interested in practical-data-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆11Feb 16, 2022Updated 4 years ago
- CLIP Tool Kit (CTK)☆22Apr 28, 2024Updated 2 years ago
- General Use Scripts and Helper functions☆16Mar 29, 2018Updated 8 years ago
- four class intro to R: basic syntax, data manipulation, data viz☆22Dec 31, 2020Updated 5 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆35Sep 4, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11May 6, 2021Updated 5 years ago
- ☆11Mar 9, 2025Updated last year
- An R package of functions for single cell -omics analysis.☆11Jul 18, 2023Updated 3 years ago
- A repo with supplementary material for a manuscript on the origin of SARS-CoV-2 origins☆11Jun 26, 2020Updated 6 years ago
- A pipeline for processing data in a comparative genomics project.☆10Jan 18, 2021Updated 5 years ago
- A tool to identify CLIP-seq peaks☆75Oct 31, 2025Updated last year
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Apr 20, 2022Updated 4 years ago
- ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration…☆32Jul 8, 2025Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆41Jun 6, 2019Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Mar 28, 2021Updated 5 years ago
- Discoverability for gene search☆13Feb 6, 2023Updated 3 years ago
- Collection of useful methods for single cell analysis☆16Oct 9, 2026Updated 3 weeks ago
- A scaffold assembling pipeline for stLFR reads.☆14Mar 15, 2021Updated 5 years ago
- Search public databases for given genotypic information☆12Mar 21, 2018Updated 8 years ago
- Endoscopic and Pathological data extraction for various endo-pathological data extraction☆13Sep 2, 2024Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆41Mar 21, 2026Updated 7 months ago
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated 2 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- cDNA read preprocessing☆96Jul 25, 2024Updated 2 years ago
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Mar 18, 2019Updated 7 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆14Aug 5, 2020Updated 6 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 9 months ago
- ☆19Apr 22, 2017Updated 9 years ago
- Toolbox package for organizing and working with TCGA data☆31Jul 2, 2026Updated 3 months ago
- A simulator of controlled transcript novelty for lrRNA-seq benchmark☆10Sep 25, 2025Updated last year
- Complete analysis pipeline for PAR-CLIP data☆10May 7, 2015Updated 11 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆12Sep 28, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An Alternative Implementation of Entropy Balancing Weights For Estimating Causal Effects☆11Jul 28, 2021Updated 5 years ago
- ☆14Sep 5, 2026Updated last month
- Inference of differential exon usage in RNA-Seq☆10Apr 18, 2026Updated 6 months ago
- AI Unlocked: Empowering Higher Ed through Research and Discovery☆19Apr 8, 2025Updated last year
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆167Updated this week
- End-to-end analysis of Oxford Nanopore single-cell sequencing, from barcode and UMI identification to gene and transcript expression☆121Jan 23, 2026Updated 9 months ago
- SCENIC+ analyses☆20Sep 26, 2023Updated 3 years ago