Brings SummarizedExperiment to the tidyverse
☆30Mar 17, 2026Updated 3 months ago
Alternatives and similar repositories for tidySummarizedExperiment
Users that are interested in tidySummarizedExperiment are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Brings SingleCellExperiment objects to the tidyverse☆37Nov 10, 2025Updated 7 months ago
- The blog of tidyomics☆13Jul 12, 2025Updated 11 months ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆180Jun 4, 2026Updated last month
- ☆10Oct 6, 2020Updated 5 years ago
- Seurat meets tidyverse. The best of both worlds.☆166Mar 3, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆18May 19, 2026Updated last month
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Sep 23, 2020Updated 5 years ago
- Client to access ExperimentHub resources☆11Jun 15, 2026Updated 2 weeks ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Apr 30, 2026Updated 2 months ago
- Draw heatmap simply using a tidy data frame☆360Feb 7, 2026Updated 4 months ago
- Helper script for bioconductor/bioconductor_docker☆13May 19, 2026Updated last month
- Coefficient of Variation (CV) and Coefficient of Quartile Variation (CQV) with Confidence Intervals (CI)☆10May 31, 2026Updated last month
- Introduction to the Bioconductor project☆19Oct 17, 2025Updated 8 months ago
- Differential expression and allelic analysis, nonparametric statistics☆32Jan 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- code for tutorials, office hours, and other help i've given☆13Jun 4, 2025Updated last year
- ☆18Oct 17, 2023Updated 2 years ago
- An r package that works as a wrapper to homologene☆49Nov 2, 2023Updated 2 years ago
- Numerical Run Length Encoding and Arithmetic in Cython☆19Jan 28, 2026Updated 5 months ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 4 years ago
- Create .mzML files through the R Console☆12Jun 14, 2026Updated 3 weeks ago
- Demonstration of the use of an R package to organize a data analysis project☆23Mar 30, 2020Updated 6 years ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 3 years ago
- Client for the Bioconductor AnnotationHub web resource☆19Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Jul 22, 2025Updated 11 months ago
- Associate pathways + gene ontologies with significant genes.☆10Jun 5, 2023Updated 3 years ago
- Tools for Unmixing Spectral Flow Cytometry Data☆37Jun 26, 2026Updated last week
- distinct: a method for differential analyses via hierarchical permutation tests☆13Dec 4, 2023Updated 2 years ago
- Extended ComplexHeatmap☆12Jan 5, 2025Updated last year
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆40Jun 6, 2023Updated 3 years ago
- Course website for Genomic Data Visualization 2024☆27Mar 15, 2024Updated 2 years ago
- An R interface to write OpenCL functions☆11Mar 15, 2022Updated 4 years ago
- Spatial Image Analysis of Tissues☆15Dec 8, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆10Oct 31, 2023Updated 2 years ago
- A project demonstrating the integration of Docker, DuckDB, R, and {targets} for robust and reproducible data pipelines.☆21Dec 29, 2024Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆30Oct 10, 2025Updated 8 months ago
- ☆33May 4, 2025Updated last year
- Core flow cytometry infrastructure☆60May 27, 2026Updated last month
- Tidy Verbs for Fast Data Manipulation☆108Apr 27, 2026Updated 2 months ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago