randel / MINDLinks
Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
☆45Updated 2 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- An R Package for Geneset Enrichment Workflows☆76Updated this week
- An r package that works as a wrapper to homologene☆46Updated last year
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated this week
- Toolkit for Single-Cell Velocity☆59Updated 2 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated last month
- Lightweight Iterative Gene set Enrichment in R☆57Updated 11 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated 9 months ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆66Updated last month
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- ☆42Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- ☆62Updated 6 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated 3 weeks ago
- A General Framework for Consensus Partitioning☆63Updated 7 months ago
- ☆55Updated 7 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 2 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- An R package for visualising cell-cell interactions☆43Updated last year
- Normalize CITEseq Data☆66Updated 5 months ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- ☆55Updated 4 years ago