Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
☆47May 3, 2023Updated 2 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- Gene Expression Decomposition and Integration☆19Feb 9, 2026Updated 2 weeks ago
- Independent Hypothesis Weighting☆16Sep 25, 2023Updated 2 years ago
- Multi-subject Single Cell Deconvolution☆286Mar 4, 2024Updated last year
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- ☆20May 20, 2021Updated 4 years ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆13Oct 27, 2015Updated 10 years ago
- ☆10May 22, 2019Updated 6 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆13Feb 29, 2020Updated 6 years ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 4 months ago
- R package for generalized binary covariance decomposition.☆14Jul 13, 2025Updated 7 months ago
- TCR Reconstruction Algorithm for Paired-End Single cell☆14Oct 13, 2019Updated 6 years ago
- R code to work with the NIH RePORTER API☆11Feb 11, 2026Updated 2 weeks ago
- ☆61Jun 17, 2021Updated 4 years ago
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 2 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- ☆18Sep 13, 2022Updated 3 years ago
- ☆17Oct 3, 2022Updated 3 years ago
- Find causal cell-types underlying complex trait genetics☆92Feb 8, 2026Updated 3 weeks ago
- ☆14Jul 1, 2025Updated 8 months ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆58Jan 30, 2026Updated last month
- epigenome analysis to rank transcription factors☆15Dec 19, 2019Updated 6 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 5 years ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- ☆19Feb 17, 2021Updated 5 years ago
- Primo☆16Sep 2, 2021Updated 4 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Feb 9, 2021Updated 5 years ago
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆19May 24, 2021Updated 4 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Mar 15, 2023Updated 2 years ago
- Toolkit for genome-wide analysis of tandem repeats☆59Feb 19, 2026Updated last week
- InstaPrism is an R package for fast implementation of BayesPrism☆47Jun 3, 2024Updated last year
- A random-forest-based approach for imputing clustered incomplete data☆36May 6, 2017Updated 8 years ago
- Fast Inference of Networks from Directed Regulations☆22Dec 7, 2023Updated 2 years ago
- Co-expression network management based on WGCNA + k-means☆21May 11, 2021Updated 4 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Jul 15, 2022Updated 3 years ago
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago