Alternatives and similar repositories for jsorolla

Users that are interested in jsorolla are comparing it to the libraries listed below

• ncbi / magicblast
  ☆36Updated 8 months ago
• opencb / biodata
  Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…
  ☆31Updated 2 weeks ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• ga4gh / mme-apis
  Documentation for the MatchmakerExchange APIs
  ☆34Updated 2 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆77Updated 3 weeks ago
• ekg / fastahack
  utilities for indexing and sequence extraction from FASTA files
  ☆59Updated 4 years ago
• 3DGenomes / TADkit
  3D Genome Browser
  ☆32Updated 3 years ago
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆85Updated last year
• amplab / smash
  Benchmarking toolkit for variant calling
  ☆48Updated 5 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• biosustain / goodbye-genbank
  A Python package for Biopython that gives feature annotations from GenBank records a new and better life
  ☆14Updated 9 years ago
• broadinstitute / firepony
  Efficient base quality score recalibrator for NGS data
  ☆24Updated 10 years ago
• opencb / cellbase
  High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a ne…
  ☆92Updated 3 weeks ago
• opencb-bigdata-viz / genome-maps
  A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.
  ☆27Updated 12 years ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• biopython / biopython_docker
  Dockerfiles to build Biopython instances
  ☆28Updated 9 years ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• czbiohub-sf / orpheum
  Orpheum (Previously called and published under sencha) is a Python package for directly translating RNA-seq reads into coding protein seq…
  ☆18Updated 3 years ago
• seandavi / SRAdb
  Git mirror of Bioconductor SRAdb package
  ☆23Updated 7 years ago
• dib-lab / screed
  a simple read-only sequence database, designed for short reads
  ☆65Updated last year
• brentp / cruzdb
  python access to UCSC genomes database
  ☆136Updated 5 years ago
• josiahseaman / FluentDNA
  FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as …
  ☆69Updated 4 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• homologus / Pandoras-Toolbox-for-Bioinformatics
  A collection of well-known bioinformatics programs.
  ☆25Updated 10 years ago
• vixis / angularplasmid
  DNA Plasmid Visualization Component using AngularJS
  ☆135Updated 5 months ago
• gkno / gkno_launcher
  The gkno launcher for executing tools or pipelines
  ☆31Updated 8 years ago
• mengqvist / DNApy
  Code for DNA plasmid editing.
  ☆43Updated 7 years ago
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 7 years ago