bartongroup / AlmostSignificantLinks
A server for maintaining high-throughput sequencing QC data
☆13Updated 3 weeks ago
Alternatives and similar repositories for AlmostSignificant
Users that are interested in AlmostSignificant are comparing it to the libraries listed below
Sorting:
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 6 years ago
- Docker image of JBrowse Genome Browser☆15Updated 4 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- ☆28Updated 6 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 13 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- ☆25Updated 4 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 9 years ago
- ☆13Updated 7 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆40Updated 4 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Updated 8 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆14Updated this week
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 4 years ago
- BED QC tool (in the making)☆16Updated 3 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 months ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago