bartongroup / AlmostSignificantLinks
A server for maintaining high-throughput sequencing QC data
☆13Updated 2 years ago
Alternatives and similar repositories for AlmostSignificant
Users that are interested in AlmostSignificant are comparing it to the libraries listed below
Sorting:
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- ☆25Updated 4 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- What's The Function of these genes?☆22Updated 8 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 11 months ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- ☆13Updated 7 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- CLI to automate Nextflow pipeline testing☆12Updated 2 weeks ago
- full taxonomer cython repository☆22Updated 5 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 6 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 4 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 5 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated 3 months ago
- Terraform template to create AWS resources to execute jobs using nextflow☆22Updated 2 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 13 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆40Updated 4 years ago
- ☆19Updated 8 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago