bartongroup / AlmostSignificantLinks
A server for maintaining high-throughput sequencing QC data
☆13Updated 3 months ago
Alternatives and similar repositories for AlmostSignificant
Users that are interested in AlmostSignificant are comparing it to the libraries listed below
Sorting:
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- ☆26Updated 5 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- ☆13Updated 8 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Updated 9 years ago
- Terraform template to create AWS resources to execute jobs using nextflow☆22Updated 2 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- BED QC tool (in the making)☆16Updated 3 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 5 months ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Clonal reconstruction from HTS data☆10Updated 4 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago