galaxy-genome-annotation / docker-jbrowseLinks
Docker image of JBrowse Genome Browser
☆15Updated 4 years ago
Alternatives and similar repositories for docker-jbrowse
Users that are interested in docker-jbrowse are comparing it to the libraries listed below
Sorting:
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated last month
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 6 months ago
- A tiny package manager for crucial unix and bioinformatics tools☆27Updated 10 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 6 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- interactive plots for differential expression analysis☆34Updated 5 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 3 months ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- ☆26Updated 5 years ago
- ☆13Updated 8 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 4 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Updated 7 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 11 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago