Docker image of JBrowse Genome Browser
☆15Apr 12, 2021Updated 4 years ago
Alternatives and similar repositories for docker-jbrowse
Users that are interested in docker-jbrowse are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- JBrowse 1.x Plugin Registry☆14Sep 10, 2023Updated 2 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 7 months ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Oct 4, 2021Updated 4 years ago
- JBrowse plugin for methylation related things☆16Oct 9, 2018Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A tiny package manager for crucial unix and bioinformatics tools☆27Apr 30, 2015Updated 10 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Mar 13, 2019Updated 7 years ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆14Updated this week
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 11 years ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).☆16Mar 13, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Jul 22, 2023Updated 2 years ago
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- ApE- A plasmid Editor☆13Jan 12, 2022Updated 4 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Sep 19, 2017Updated 8 years ago
- full taxonomer cython repository☆22Dec 1, 2019Updated 6 years ago
- Eukaryotic genome annotation software.☆23Mar 11, 2026Updated 2 weeks ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆23Dec 27, 2018Updated 7 years ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Mar 4, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆16Jun 11, 2017Updated 8 years ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 6 years ago
- Computational method for Comparative ReConstruction of genome-scale metabolic networks☆22Mar 23, 2018Updated 8 years ago
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Apr 7, 2017Updated 8 years ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated last year
- localised duplicate detection on patterned flow cells☆10Feb 27, 2019Updated 7 years ago
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Sep 28, 2021Updated 4 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated 2 weeks ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21May 23, 2025Updated 10 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al☆25Jul 15, 2024Updated last year
- Code for Shipman et al. 2017☆13Jul 12, 2017Updated 8 years ago
- ☆12Jun 29, 2018Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- Anno is a variant annotation tool☆24May 18, 2016Updated 9 years ago