galaxy-genome-annotation / docker-jbrowse
Docker image of JBrowse Genome Browser
☆14Updated 3 years ago
Alternatives and similar repositories for docker-jbrowse:
Users that are interested in docker-jbrowse are comparing it to the libraries listed below
- BigWig manpulation tools using libBigWig and htslib☆29Updated 6 months ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 2 years ago
- ☆24Updated 4 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 8 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 2 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated last year
- Simplify snpEff annotations for interesting cases☆21Updated 6 years ago
- interactive plots for differential expression analysis☆29Updated this week
- A python package for showing JBrowse views☆23Updated last year
- A tiny package manager for crucial unix and bioinformatics tools☆27Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 2 months ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- BED QC tool (in the making)☆16Updated 2 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 5 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 3 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 4 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆22Updated 6 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆35Updated 14 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- Annotating principal splice isoforms☆14Updated 4 months ago
- ☆18Updated 4 years ago
- A JBrowse plugin for viewing GWAS data☆11Updated 3 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools☆22Updated 6 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- Personal diploid genome creation and coordinate conversion☆23Updated this week