galaxy-genome-annotation / docker-jbrowse
Docker image of JBrowse Genome Browser
☆14Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for docker-jbrowse
- BigWig manpulation tools using libBigWig and htslib☆28Updated 3 months ago
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- A tiny package manager for crucial unix and bioinformatics tools☆27Updated 9 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆41Updated 2 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 3 years ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- RNA-Seq pipeline☆34Updated 9 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- A python package for showing JBrowse views☆23Updated 10 months ago
- Personal diploid genome creation and coordinate conversion☆21Updated last month
- Simplify snpEff annotations for interesting cases☆21Updated 5 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆20Updated 4 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 6 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 3 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 5 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆20Updated last week
- FREE Divergence Error-Correcting DNA Barcodes☆8Updated 6 years ago
- ☆23Updated 4 years ago
- Allele frequency filter app☆14Updated 2 years ago
- A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools☆22Updated 6 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆42Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆32Updated 3 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 8 months ago
- ☆9Updated 8 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆19Updated this week