galaxy-genome-annotation / docker-jbrowse
Docker image of JBrowse Genome Browser
☆14Updated 3 years ago
Alternatives and similar repositories for docker-jbrowse:
Users that are interested in docker-jbrowse are comparing it to the libraries listed below
- BigWig manpulation tools using libBigWig and htslib☆28Updated 5 months ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- interactive plots for differential expression analysis☆25Updated this week
- ☆18Updated 4 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 6 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 5 years ago
- Simplify snpEff annotations for interesting cases☆21Updated 5 years ago
- A python package for showing JBrowse views☆23Updated last year
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆28Updated 5 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- ☆13Updated 7 years ago
- BED QC tool (in the making)☆15Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- RNA-Seq pipeline☆34Updated 9 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- Chromatin segmentation in R☆19Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 10 months ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- ☆24Updated 4 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated 9 months ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Updated 3 years ago
- ☆17Updated 8 months ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Allele frequency filter app☆14Updated 2 years ago