datduong / word2vec2compareGenes
Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.
☆12Updated 8 years ago
Alternatives and similar repositories for word2vec2compareGenes
Users that are interested in word2vec2compareGenes are comparing it to the libraries listed below
Sorting:
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 10 months ago
- ☆21Updated 8 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Literature mining for T cell relations☆23Updated 2 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 4 years ago
- Code accompanying the publication for compressed graph annotation☆13Updated 6 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11Updated 8 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Updated 5 years ago
- ☆12Updated 5 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆29Updated 7 years ago
- Out-of-Core Principal Component Analysis☆19Updated 7 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Updated 8 years ago
- ☆11Updated 7 years ago
- ☆10Updated 3 years ago
- Network inference by fusing data from diverse distributions☆14Updated 8 years ago
- Sequence data label generation and ingestion into deep learning models☆12Updated 3 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆14Updated 6 years ago
- Analysis code for knowledge discovery project☆12Updated 6 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- DEPRECATED: Store and query public TCGA data☆11Updated 8 years ago
- Tree hidden Markov model for learning epigenetic states in multiple cell types☆28Updated 11 years ago
- Tools for munging genomic data☆21Updated 5 years ago
- ☆11Updated 7 years ago
- ☆12Updated 6 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Updated 5 years ago
- TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…☆15Updated 2 years ago
- A Python library to work with high-throughput sequencing data in the context of data integration☆14Updated 7 years ago
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Updated 7 years ago
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆20Updated 8 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 6 years ago