Alternatives and similar repositories for toolchest-client-python

Users that are interested in toolchest-client-python are comparing it to the libraries listed below

• ababaian / bioFreelancers
  Freelance bioinformaticians directory
  ☆10Updated 2 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆42Updated 2 months ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆47Updated 9 years ago
• fulcrumgenomics / guide-counter
  A better, faster way to count guides in CRISPR screens.
  ☆34Updated 9 months ago
• Lattice-Automation / repp
  repository-based plasmid design
  ☆29Updated 3 years ago
• MatthewRalston / kmerdb
  Python CLI for alignment-free genomics.
  ☆12Updated last month
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆30Updated last year
• taxoniq / taxoniq
  Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data
  ☆60Updated last year
• ncbi / magicblast
  ☆36Updated 8 months ago
• rec3141 / ddmp
  Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.
  ☆13Updated 13 years ago
• hammerlab / bai-indexer
  Build an index for your BAM Index (BAI)
  ☆17Updated 10 years ago
• seqeralabs / wave
  On-demand containers provisioning service
  ☆46Updated this week
• brentp / fraguracy
  overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
  ☆33Updated 7 months ago
• Ad115 / EnsemblRest
  A Python interface to the Ensembl REST APIs, biological data at your fingertips.
  ☆11Updated last year
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆31Updated 7 months ago
• 10XGenomics / rust-bwa
  Rust wrapper of the BWA C API
  ☆18Updated 7 months ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 8 years ago
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆22Updated 3 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• olgabot / abi2fastq
  abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ
  ☆11Updated 8 years ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆67Updated last month
• BIMSBbioinfo / pigx_sars-cov-2
  PiGx SARS-CoV-2 wastewater sequencing pipeline
  ☆18Updated 2 years ago
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆52Updated last year
• RWilton / Arioc
  Arioc: GPU-accelerated DNA short-read alignment
  ☆70Updated 7 months ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆61Updated 2 months ago
• johanneskoester / alpaca
  ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…
  ☆23Updated last year
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆33Updated last week
• Edinburgh-Genome-Foundry / crazydoc
  Read DNA sequences from colourful Microsoft Word documents
  ☆34Updated 7 months ago
• bokulich-lab / q2-fondue
  Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere
  ☆25Updated 2 weeks ago