trytoolchest / toolchest-client-pythonLinks
Toolchest Python client
☆15Updated 2 years ago
Alternatives and similar repositories for toolchest-client-python
Users that are interested in toolchest-client-python are comparing it to the libraries listed below
Sorting:
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- A better, faster way to count guides in CRISPR screens.☆33Updated 5 months ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- On-demand containers provisioning service☆43Updated last week
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 7 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- ☆26Updated 2 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 3 months ago
- Python CLI for alignment-free genomics.☆12Updated last month
- a minimal, scriptable genome browser for python☆51Updated 9 months ago
- WDL plugin for pytest☆48Updated 2 years ago
- ☆37Updated 5 months ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆46Updated last month
- Terraform template to create AWS resources to execute jobs using nextflow☆22Updated 2 years ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 3 weeks ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- Command line utility for manipulating Illumina-generated FASTQ files.☆91Updated 3 weeks ago
- SQL support plugin for Nextflow☆32Updated last week
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Rust wrapper of the BWA C API☆18Updated 4 months ago
- Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere☆24Updated last month
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 6 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 4 months ago
- Serves a web interface and RESTful API for reference genome assets.☆12Updated 3 years ago
- Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data☆59Updated last year