opencb-bigdata-viz / genome-mapsLinks
A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.
☆27Updated 12 years ago
Alternatives and similar repositories for genome-maps
Users that are interested in genome-maps are comparing it to the libraries listed below
Sorting:
- Nanopore desc☆18Updated 9 years ago
- A complete suite of tools to work with genomic variation data, from VCF tools to variant profiling or genomic statistics☆13Updated 9 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- SVG based genome viewer written in javascript using D3☆33Updated 10 years ago
- a wee tool for random access into BGZF files.☆85Updated 7 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- a string to graph aligner☆41Updated 9 years ago
- ☆26Updated 4 years ago
- Utilities to create and analyze gVCF files☆38Updated 8 years ago
- tools for error correction and working with long read data☆44Updated 10 years ago
- RTG Core: Software for alignment and analysis of next-gen sequencing data.☆48Updated 4 months ago
- Scripts for implementing read until and other examples.☆32Updated 5 years ago
- Guide to transcriptome assembly & analysis☆21Updated 8 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 4 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Updated 11 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 3 months ago
- SV detection from paired end reads mapping☆38Updated 15 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- The open source version of the Melbourne Genomics Health Alliance Exome Sequencing Pipeline☆33Updated 7 years ago
- JHU EN.600.649: Computational Genomics: Applied Comparative Genomics☆58Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 12 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 10 months ago