fikipollo / paintomics3
Integrative visualization of multiple omic datasets onto KEGG pathways.
☆11Updated 3 years ago
Alternatives and similar repositories for paintomics3:
Users that are interested in paintomics3 are comparing it to the libraries listed below
- Docker image of JBrowse Genome Browser☆15Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 8 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last month
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 4 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 11 months ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 6 years ago
- Genetics training camp☆21Updated 4 years ago
- WES HLA Typing based on multiple alternative tools☆15Updated 4 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- A python script used to annotate genomic intervals.☆18Updated 4 years ago
- GWAS and rare variants tests at high speed using regenie☆13Updated 4 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 3 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 5 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- An automated RNA-seq pipeline using Nextflow☆37Updated 7 months ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 5 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 7 months ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Detect somatic variants from tumor and normal WGS/WXS data☆15Updated 2 months ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago