nceglia / genevectorLinks
Vector representations of gene co-expression in single cell RNAseq.
☆36Updated last month
Alternatives and similar repositories for genevector
Users that are interested in genevector are comparing it to the libraries listed below
Sorting:
- Single cell omics biology annotations☆51Updated 8 months ago
- ☆61Updated last year
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆36Updated last week
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated last month
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆34Updated 8 months ago
- Gene group activity utility functions for Scanpy☆99Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 11 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆66Updated 5 months ago
- ☆46Updated last year
- Predict RNA velocity through deep learning☆71Updated 2 years ago
- ACTIONet single-cell analysis framework☆44Updated last year
- Non-parametric density inference for single-cell analysis.☆74Updated 7 months ago
- ☆59Updated 7 months ago
- cTPnet Package☆27Updated 3 years ago
- ☆26Updated 2 years ago
- ☆26Updated 7 months ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- ☆59Updated this week
- ☆56Updated last year
- Python implementation of the Slingshot pseudotime algorithm☆69Updated last month
- ☆30Updated 4 months ago
- ☆20Updated 3 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆39Updated 2 years ago
- ☆89Updated last year
- SPROD: Spatial expression profiling de-noising☆36Updated 2 years ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Updated 6 months ago
- Spatial direct messaging detected by bivariate Moran☆32Updated 5 months ago
- Identifying tumor cells at the single-cell level using machine learning☆49Updated last year
- Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)☆30Updated 7 months ago
- Multi-modal single cell analysis pipelines☆61Updated 2 weeks ago