FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phosphoproteomic and metabolomic datasets.
☆14Jan 20, 2022Updated 4 years ago
Alternatives and similar repositories for ShinyFUNKI
Users that are interested in ShinyFUNKI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a pipeline of metabolomics data processing and quality control☆29Apr 17, 2026Updated 5 months ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆18Nov 30, 2024Updated last year
- Exploring Isoform-specific interactions☆13Jul 23, 2026Updated last month
- RNA-binding protein motif analysis☆11Sep 29, 2025Updated 11 months ago
- Tired of check-in/out with Woffu? I'll do it for you :)☆10Sep 9, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Open Virtual Research Environment☆13Sep 7, 2026Updated last week
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- Read a list of paper titles and save their DBLP bibtex entries in a file.☆10Nov 19, 2019Updated 6 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- ☆16Apr 2, 2025Updated last year
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 9 months ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 5 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13May 1, 2023Updated 3 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆16Sep 16, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- htmlwidgets for chemdoodle web components☆18Apr 11, 2021Updated 5 years ago
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 3 years ago
- ☆12Jan 18, 2023Updated 3 years ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Dec 7, 2019Updated 6 years ago
- RothC code in Python language☆16Mar 12, 2025Updated last year
- Tools for building predictive models in epidemiology.☆18Sep 11, 2026Updated last week
- Fast streams for block gzip files.☆15Nov 11, 2025Updated 10 months ago
- A package for Bayesian causal infe☆15Jan 14, 2024Updated 2 years ago
- Feature selection for preserving biological trajectories in single-cell data☆21Jun 24, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Hyper-AdaC: Adaptive clustering-based hypergraph representation of whole slide images for survival analysis☆16Nov 28, 2022Updated 3 years ago
- 📜 A minimal whiteboard for sketching, annotating and prototyping☆20Sep 12, 2026Updated last week
- Mapping-free software for fishing relevant reads in an RNA-Seq sample☆19Dec 9, 2020Updated 5 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- 🍊🔬 Bioinformatics add-on for Orange3☆25Updated this week
- Spaghetti: in situ analysis of 16S rRNA amplicons obtained by nanopore sequencing☆20Jul 26, 2024Updated 2 years ago
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Oct 12, 2022Updated 3 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆25Aug 3, 2023Updated 3 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 5 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- ☆13Feb 24, 2025Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated 2 years ago
- ☆28Sep 6, 2026Updated 2 weeks ago
- a clever bot to rate and improve your ggplot plot √☆12Jan 12, 2019Updated 7 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆12May 12, 2025Updated last year