hyochoi / SCISSORLinks
Shape Changes In Selecting Sample Outliers in RNA-seq
☆12Updated 3 years ago
Alternatives and similar repositories for SCISSOR
Users that are interested in SCISSOR are comparing it to the libraries listed below
Sorting:
- binned motif enrichment analysis and visualisation☆41Updated last month
- A single cell sequencing read simulator.☆33Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 2 years ago
- scover☆23Updated last year
- Snakemake pipeline for microexon discovery and quantification☆20Updated 9 months ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆12Updated last week
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Updated last year
- An R interface to the MEME Suite☆52Updated 4 months ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- simplified cellranger for long-read data☆19Updated last month
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated 2 years ago
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- ☆23Updated 7 months ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Updated 3 years ago
- Motif manipulation functions for R.☆30Updated 2 weeks ago
- Single-cell RNA Processing Software☆11Updated 4 months ago
- ☆41Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆22Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Docker container for genomics analyses in R.☆25Updated last year
- ☆33Updated 10 months ago
- Network construction Algorithm☆22Updated last year
- Bead-based single-cell atac processing☆33Updated 3 years ago