hyochoi / SCISSORLinks
Shape Changes In Selecting Sample Outliers in RNA-seq
☆11Updated 2 years ago
Alternatives and similar repositories for SCISSOR
Users that are interested in SCISSOR are comparing it to the libraries listed below
Sorting:
- Snakemake pipeline for microexon discovery and quantification☆20Updated 4 months ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆14Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆22Updated 6 months ago
- ☆17Updated last year
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Pan-transcriptomic phenotyping☆18Updated 3 weeks ago
- Scripts to install as a Bioconda package for making workflows☆18Updated 8 months ago
- ☆20Updated last year
- scover☆23Updated last year
- Benchmarking long-read RNA-seq analysis tools☆27Updated 3 months ago
- ☆22Updated 11 months ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- Single-cell RNA Processing Software☆11Updated 2 weeks ago
- Differential ATAC-seq toolkit☆27Updated last year
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- ☆20Updated last year
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆28Updated 2 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆19Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆28Updated 5 months ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 2 months ago