JamesJoly / DGSEALinks
An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment of two gene sets.
☆13Updated 2 years ago
Alternatives and similar repositories for DGSEA
Users that are interested in DGSEA are comparing it to the libraries listed below
Sorting:
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 3 years ago
- Gene Expression Decomposition and Integration☆18Updated 4 months ago
- CellAnn☆12Updated last year
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Pairwise Hierarchical Model☆19Updated 3 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ☆12Updated 4 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Tools for assessing clustering robustness☆25Updated last week
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆12Updated 5 years ago
- ☆22Updated last year
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆36Updated last year
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- ☆10Updated 5 months ago
- ☆16Updated 2 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- ☆14Updated 6 years ago
- scover☆23Updated last year
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- ☆24Updated last month
- A Tidy Framework to Hack Gene Expression Signatures☆19Updated 2 months ago
- ☆17Updated last year
- CiteFuse:☆28Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago