JamesJoly / DGSEALinks
An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment of two gene sets.
☆13Updated 2 years ago
Alternatives and similar repositories for DGSEA
Users that are interested in DGSEA are comparing it to the libraries listed below
Sorting:
- CellAnn☆12Updated last year
- Gene Expression Decomposition and Integration☆17Updated 4 months ago
- ☆12Updated last year
- ☆16Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆23Updated 2 years ago
- Pairwise Hierarchical Model☆18Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Tools for assessing clustering robustness☆25Updated this week
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- BioCarta pathway images☆11Updated last year
- Trans-association between HLA and TCR-CDR3☆17Updated 2 years ago
- ☆24Updated 3 weeks ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface☆16Updated 4 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- ☆14Updated 6 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆17Updated 11 months ago
- Code for EpiMap data browser☆14Updated last year
- ☆12Updated 5 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆19Updated 2 months ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆12Updated 4 years ago
- ☆22Updated last year