JamesJoly / DGSEALinks
An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment of two gene sets.
☆13Updated 2 years ago
Alternatives and similar repositories for DGSEA
Users that are interested in DGSEA are comparing it to the libraries listed below
Sorting:
- ☆20Updated last year
- SCASA: Single cell transcript quantification tool☆21Updated last year
- CellAnn☆12Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆12Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- ☆12Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆24Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ☆23Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Pairwise Hierarchical Model☆18Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- omics data analysis using clusterProfiler ;)☆13Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated last month
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆15Updated last week
- ☆18Updated last month
- ☆15Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆12Updated 4 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆12Updated 5 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Gene Expression Decomposition and Integration☆17Updated 3 months ago
- ☆16Updated 2 years ago
- ☆12Updated 5 years ago
- ☆17Updated 10 months ago