Oafish1 / JAMIELinks
Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)
☆12Updated 2 months ago
Alternatives and similar repositories for JAMIE
Users that are interested in JAMIE are comparing it to the libraries listed below
Sorting:
- Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)☆28Updated 2 months ago
- Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)☆19Updated last year
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- ☆11Updated 9 months ago
- A combination of RoBERTa trained from scratch on masking histone modification patterns rather than the English language and XGBoost, pred…☆13Updated 4 years ago
- ☆14Updated 2 years ago
- Differential Robust PCA☆13Updated 2 years ago
- Tensorflow implementation for the SVGP-VAE model.☆22Updated 3 years ago
- Implementation of the algorithm detailed in paper "Evolutionary design of molecules based on deep learning and a genetic algorithm"☆23Updated last year
- TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty …☆30Updated last year
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆14Updated 2 years ago
- ☆29Updated last year
- ☆14Updated 4 months ago
- Protein structure prediction is the task of predicting the 3-dimensional structure (shape) of a protein given its amino acid sequence and…☆18Updated 2 years ago
- SemI-SUpervised generative Autoencoder models for single cell data☆18Updated 4 years ago
- ☆18Updated 3 years ago
- ☆8Updated last year
- Gene Neural Network (GNN)☆11Updated 5 years ago
- ☆24Updated 4 months ago
- scDCC: Single Cell Deep Constrained Clustering☆40Updated 10 months ago
- Code for the paper: Mixed Models with Multiple Instance Learning☆19Updated last month
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆49Updated last year
- A repository with exploration into using transformers to predict DNA ↔ transcription factor binding☆84Updated 3 years ago
- Hierarchical Graph Clustering using Node Pair Sampling (MLG, KDD Workshop) - Multi-scale Clustering in Graphs using Modularity (DiVA)☆14Updated 4 years ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆65Updated 4 months ago
- ☆12Updated 4 years ago
- STAgent is a multimodal LLM-based AI agent that enables deep research about spatial transcriptomics data☆32Updated 2 weeks ago
- Interpretable splicing model☆20Updated last year
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- An annotated implementation of the Hyena Hierarchy paper☆33Updated 2 years ago