☆13Mar 2, 2020Updated 6 years ago
Alternatives and similar repositories for sepsis_signature
Users that are interested in sepsis_signature are comparing it to the libraries listed below
Sorting:
- ☆12Nov 19, 2023Updated 2 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- ☆33Jan 13, 2022Updated 4 years ago
- Analysis notebooks and data for AML hierarchies paper☆18Jun 28, 2023Updated 2 years ago
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- A common data format and inference environment for single-cell trajectories 📦☆19Nov 26, 2025Updated 3 months ago
- ☆19Jul 8, 2021Updated 4 years ago
- Batch alignment of single-cell transcriptomics data using deep metric learning☆22Feb 5, 2024Updated 2 years ago
- ☆20May 30, 2022Updated 3 years ago
- Visualize the results of cell-cell communication analysis☆25Jan 21, 2023Updated 3 years ago
- scripts associated with NAFLD-NASH project☆28May 23, 2024Updated last year
- Single cell analysis in regenerative lineages and immune-mediated pruning in lung cancer metastasis☆23Jun 5, 2020Updated 5 years ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆25May 18, 2021Updated 4 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆25May 3, 2023Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Oct 17, 2024Updated last year
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- ☆26Dec 25, 2023Updated 2 years ago
- A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)☆27Jun 21, 2023Updated 2 years ago
- R script for the covid balf data analysis☆65Aug 12, 2020Updated 5 years ago
- collected resource for scRNA-seq analysis☆67Jul 19, 2023Updated 2 years ago
- benchmark for single-cell RNA-seq imputation methods☆29Mar 16, 2024Updated last year
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆31Jul 13, 2024Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Dec 3, 2024Updated last year
- A portable and fast single cell type identifier☆64May 12, 2021Updated 4 years ago
- Vector representations of gene co-expression in single cell RNAseq.☆36Nov 8, 2025Updated 4 months ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆89Oct 9, 2024Updated last year
- ☆11Mar 23, 2022Updated 3 years ago
- ☆14Oct 17, 2024Updated last year
- R package to analyze single cell DNA sequencing data.☆10Jan 28, 2026Updated last month
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆86Dec 15, 2022Updated 3 years ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39May 15, 2020Updated 5 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Jan 14, 2024Updated 2 years ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆141Dec 25, 2021Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Mar 25, 2024Updated last year
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Dec 30, 2024Updated last year
- ☆10Feb 12, 2019Updated 7 years ago
- Mobile and Web application for real time early prediction of sepsis(6 hours before the onset). I did pre processing, data visualisation ,…☆11Sep 20, 2020Updated 5 years ago