scDREAMER for atlas-level integration of single-cell datasets using deep generative model paired with adversarial classifier
☆49Apr 12, 2024Updated 2 years ago
Alternatives and similar repositories for scDREAMER
Users that are interested in scDREAMER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metric learning-based graph-partitioned trajectory inference from single-cell data☆12Apr 28, 2023Updated 3 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆12Oct 23, 2024Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆19Aug 29, 2023Updated 2 years ago
- cross-species analysis of cell identities, markers and regulations☆12Jul 11, 2025Updated 9 months ago
- Repository for the clone2vec python package☆15Apr 10, 2026Updated 3 weeks ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 9 months ago
- ☆41Jun 24, 2025Updated 10 months ago
- ☆20May 30, 2022Updated 3 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆18Mar 27, 2026Updated last month
- https://molecular-neurogenetics.github.io/truster/☆12Jul 14, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Apr 4, 2023Updated 3 years ago
- ☆17Apr 16, 2026Updated 2 weeks ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated last year
- ☆19Apr 16, 2026Updated 2 weeks ago
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- single-cell decorrelated module networks☆31Aug 24, 2024Updated last year
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- Cellsnake tool main repo☆36Feb 22, 2024Updated 2 years ago
- ☆22Feb 27, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆19Dec 1, 2021Updated 4 years ago
- ☆11Apr 6, 2022Updated 4 years ago
- Biology-centered data-driven quality control for scRNA-seq☆20May 22, 2023Updated 2 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆19Jul 31, 2024Updated last year
- ☆11Dec 16, 2021Updated 4 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆44Jul 10, 2024Updated last year
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Jun 7, 2025Updated 10 months ago
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆17Dec 7, 2025Updated 4 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Paired Insertion Counting for snATAC-seq data☆19Mar 15, 2026Updated last month
- ☆18Oct 22, 2024Updated last year
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆36Dec 15, 2025Updated 4 months ago