NGS Language Bindings
☆120Dec 6, 2023Updated 2 years ago
Alternatives and similar repositories for ngs
Users that are interested in ngs are comparing it to the libraries listed below
Sorting:
- ncbi-vdb☆93Updated this week
- ☆108Dec 3, 2025Updated 3 months ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- Tools for bam file processing☆55Apr 20, 2015Updated 10 years ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆25Dec 11, 2017Updated 8 years ago
- SRA Tools☆1,309Updated this week
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆127Jun 9, 2022Updated 3 years ago
- Isaac Genome Alignment Software☆36Apr 7, 2015Updated 10 years ago
- Peakzilla is a self-learning algorithm to identify transcription factor binding sites from ChIP-seq data. I would be very happy if you tr…☆21Aug 18, 2025Updated 6 months ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 8 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 3 months ago
- example applications built using bíogo☆18Apr 19, 2021Updated 4 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Apr 23, 2016Updated 9 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Jul 12, 2020Updated 5 years ago
- Tools for early stage alignment file processing☆95Mar 12, 2019Updated 6 years ago
- ☆96Sep 21, 2022Updated 3 years ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- Fast and memory-efficient sequencing error corrector☆94Jan 4, 2026Updated last month
- Glimma R package☆50Sep 2, 2024Updated last year
- SRAToolkit has been REPLACED - see README☆38Aug 29, 2016Updated 9 years ago
- Analysis from kallisto paper☆32Feb 10, 2016Updated 10 years ago
- gvcf aggregation tool