ncbi / ngsLinks
NGS Language Bindings
☆119Updated last year
Alternatives and similar repositories for ngs
Users that are interested in ngs are comparing it to the libraries listed below
Sorting:
- ncbi-vdb☆91Updated this week
- C++ Library to parse Illumina InterOp files☆79Updated 4 months ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- Fast spliced aligner with low memory requirements☆41Updated 10 years ago
- A tool set for short variant discovery in genetic sequence data.☆202Updated 4 years ago
- ☆82Updated 6 years ago
- Small utilities for working with fastq sequence files.☆123Updated 3 years ago
- ☆95Updated 3 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated last month
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Utilities for building and managing bioconda recipes☆103Updated 2 weeks ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 6 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- SRAToolkit has been REPLACED - see README☆37Updated 9 years ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆145Updated 9 years ago
- Platypus Variant Caller☆108Updated last year
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆127Updated 3 years ago
- A powerful toolset for genome arithmetic.☆142Updated 4 years ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- ☆107Updated last week
- ABRA2☆93Updated 2 years ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆171Updated last year
- Documentation and description of AWS iGenomes S3 resource.☆117Updated 10 months ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Updated 11 years ago
- CRAM format specification and java API for read data.☆60Updated 7 years ago
- Tools for processing and analyzing structural variants.☆154Updated 3 years ago
- Sequana: a set of Snakemake NGS pipelines☆148Updated 2 weeks ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- This repo is DEPRECATED. Please use minimap2, the successor of minimap.☆106Updated 8 years ago