ncbi / ngs-toolsLinks
☆107Updated last week
Alternatives and similar repositories for ngs-tools
Users that are interested in ngs-tools are comparing it to the libraries listed below
Sorting:
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆103Updated last month
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 2 years ago
- Bayesian genotyper for structural variants☆134Updated 4 years ago
- Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference gen…☆141Updated 7 months ago
- Comparison of multiple long read datasets☆134Updated last month
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆169Updated last year
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆100Updated 3 weeks ago
- TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files☆130Updated last year
- Create statistic summary of an Oxford Nanopore read dataset☆115Updated 2 years ago
- Tools for the analysis of structural variation in genomes☆79Updated last year
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆97Updated last year
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆152Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated last month
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 3 years ago
- reference-free transcriptome assembly for short and long reads☆107Updated last year
- Fast genome analysis from unassembled short reads☆292Updated last year
- NGS Language Bindings☆119Updated last year
- Antibiotic resistance prediction in minutes☆109Updated 7 months ago
- ☆95Updated last week
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- Graph realignment tools for structural variants☆157Updated 2 years ago
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆129Updated 3 weeks ago
- Quality control tools for nanopore sequencing data☆109Updated 8 months ago