biogo / examples
example applications built using bíogo
☆18Updated 4 years ago
Alternatives and similar repositories for examples:
Users that are interested in examples are comparing it to the libraries listed below
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 6 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- workflow and resource management system for bioinformatics data analysis☆69Updated 4 years ago
- Bioinformatic infrastructure libraries☆78Updated 4 years ago
- biogo high throughput sequencing repository☆126Updated last year
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- Burrows-Wheeler Transform and FM-index in golang☆20Updated 2 years ago
- Go / Golang Bioinformatics Library☆45Updated 6 months ago
- Go implementation of ntHash☆20Updated 3 years ago
- Reader and writer of HDF5 files☆18Updated 7 years ago
- Yet Another CWL Engine by Golang☆18Updated 6 years ago
- bíogo data store repository☆38Updated 4 years ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Updated 10 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Updated 8 years ago
- open files for buffered reading and writing in #golang☆61Updated 2 years ago
- gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API se…☆15Updated 8 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- A Brand New LSH: The fly’s olfactory circuits algorithm☆11Updated 6 years ago
- Compute cluster (HPC) job submission library for Go (#golang) based on the open DRMAA standard.☆49Updated 9 months ago
- Collection of statistical routines in golang☆31Updated 7 years ago
- A collection of genomics software tools written in Go (golang).☆83Updated this week
- MIcrobiomes using Compressive Acceleration☆17Updated 7 years ago
- Variant Call Format parser library for Go☆25Updated 7 years ago
- A lightweight and high-performance bioinformatics package in Golang☆93Updated 7 months ago
- a golang library to read, write and manipulate files in the variant call format.☆69Updated 6 months ago
- Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources☆30Updated 6 years ago
- SQL-like query language for the SAM/BAM file format☆28Updated last year
- succinct labeled graphs with collections and paths☆15Updated 6 years ago
- Format CSV file as human readable table☆38Updated 4 years ago
- NGS duplicate marking☆19Updated 4 years ago