biogo / examplesLinks
example applications built using bíogo
☆18Updated 4 years ago
Alternatives and similar repositories for examples
Users that are interested in examples are comparing it to the libraries listed below
Sorting:
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- workflow and resource management system for bioinformatics data analysis☆69Updated 4 years ago
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 6 years ago
- biogo high throughput sequencing repository☆126Updated last year
- Burrows-Wheeler Transform and FM-index in golang☆20Updated 2 years ago
- Bioinformatic infrastructure libraries☆78Updated 4 years ago
- Go / Golang Bioinformatics Library☆45Updated 7 months ago
- Reader and writer of HDF5 files☆18Updated 7 years ago
- Go implementation of ntHash☆20Updated 3 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- Compute cluster (HPC) job submission library for Go (#golang) based on the open DRMAA standard.☆49Updated 10 months ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Updated 10 years ago
- Write-once-read-many table for large datasets.☆27Updated last year
- A Brand New LSH: The fly’s olfactory circuits algorithm☆11Updated 7 years ago
- Format CSV file as human readable table☆38Updated 4 years ago
- Yet Another CWL Engine by Golang☆18Updated 6 years ago
- bíogo data store repository☆38Updated 4 years ago
- gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API se…☆15Updated 8 years ago
- open files for buffered reading and writing in #golang☆61Updated 3 years ago
- Collection of statistical routines in golang☆31Updated 7 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Updated 8 years ago
- Histosketching Using Little Kmers☆57Updated 2 years ago
- Tools for developing and running pipelines with the Genomics API☆24Updated 5 years ago
- A collection of genomics software tools written in Go (golang).☆84Updated this week
- FUSE filesystem for the DNAnexus storage system☆14Updated last month
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.☆24Updated 4 years ago
- A lightweight and high-performance bioinformatics package in Golang☆93Updated 8 months ago
- SQL-like query language for the SAM/BAM file format☆29Updated last year
- Tools used to analyze data from nanopore-based experiments.☆30Updated 10 years ago