ncbi-vdb
☆103Aug 31, 2026Updated this week
Alternatives and similar repositories for ncbi-vdb
Users that are interested in ncbi-vdb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NGS Language Bindings☆123Dec 6, 2023Updated 2 years ago
- ☆113Apr 23, 2026Updated 4 months ago
- SRA Tools☆1,364Updated this week
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 9 months ago
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Jul 11, 2014Updated 12 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 5 years ago
- Tools for bam file processing☆56Apr 20, 2015Updated 11 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆11Aug 20, 2026Updated last week
- Gordon's Text utils Library☆10Apr 11, 2022Updated 4 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 3 months ago
- example applications built using bíogo☆18Apr 19, 2021Updated 5 years ago
- Fast and Accurate Classification of Sequences using Bloom filters☆16Apr 19, 2023Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 10 years ago
- MUltiScale enrIchment Calling for ChIP-Seq Datasets☆23Mar 14, 2019Updated 7 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆26Dec 11, 2017Updated 8 years ago
- Cross-platform GUI desktop application for making biological heatmaps☆19Nov 10, 2022Updated 3 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 9 years ago
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 7 years ago
- HGVS variant description extractor☆11Apr 13, 2026Updated 4 months ago
- ☆16Jan 21, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- dbVar☆41Jul 22, 2026Updated last month
- de Bruijn Graph REAd mapping Tool☆14Jul 12, 2017Updated 9 years ago
- Chromatin segmentation in R☆19Feb 4, 2018Updated 8 years ago
- Pacbio sequence alignment tool, please use "git clone" to copy and use the repository☆18Feb 17, 2019Updated 7 years ago
- SRAToolkit has been REPLACED - see README☆38Aug 29, 2016Updated 10 years ago
- Tools to process LIANTI sequence data☆23Feb 20, 2019Updated 7 years ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 3 months ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Rapid sensitive and accurate read mapping via quasi-mapping☆90Jun 5, 2020Updated 6 years ago
- Compressive Read-mapping Accelerator☆14Sep 7, 2016Updated 9 years ago
- High-level API for storing and querying sequence variant data☆20May 24, 2019Updated 7 years ago
- A program for summarising CpG methylation patterns☆20Sep 9, 2016Updated 9 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 12 years ago
- A versatile and efficient RNA-Seq read counting tool☆16Mar 30, 2016Updated 10 years ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago