ncbi / ncbi-vdb
ncbi-vdb
☆91Updated last week
Alternatives and similar repositories for ncbi-vdb:
Users that are interested in ncbi-vdb are comparing it to the libraries listed below
- NGS Language Bindings☆119Updated last year
- ☆107Updated last month
- VarDict☆198Updated last year
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated 2 weeks ago
- Gene fusion detection and visualization☆122Updated 3 years ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 6 years ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- Detect and visualize target mutations by scanning FastQ files directly☆151Updated 3 years ago
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆268Updated last year
- SRAToolkit has been REPLACED - see README☆38Updated 8 years ago
- Structural variation and indel detection by local assembly☆245Updated last month
- An ensemble approach to accurately detect somatic mutations using SomaticSeq☆196Updated 3 weeks ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆159Updated 8 months ago
- A tool set for short variant discovery in genetic sequence data.☆196Updated 4 years ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆97Updated 11 months ago
- ☆36Updated 3 weeks ago
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆216Updated 10 months ago
- ☆62Updated 8 years ago
- SV detection from paired end reads mapping☆117Updated 5 years ago
- phasing and Allele Specific Expression from RNA-seq☆114Updated 9 months ago
- Utilities for building and managing bioconda recipes☆100Updated this week
- ☆90Updated 3 years ago
- python access to UCSC genomes database☆135Updated 4 years ago
- Tools for processing and analyzing structural variants.☆151Updated 3 years ago
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆194Updated last week
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆83Updated 7 months ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆143Updated 8 years ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆147Updated last week
- ☆82Updated 6 years ago