NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
☆560Sep 9, 2026Updated last week
Alternatives and similar repositories for datasets
Users that are interested in datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to download genomes from the NCBI FTP servers☆1,086Apr 7, 2026Updated 5 months ago
- A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV☆481Jul 15, 2026Updated 2 months ago
- NCBI Prokaryotic Genome Annotation Pipeline☆390Aug 19, 2026Updated last month
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆121Sep 8, 2026Updated last week
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆391Aug 31, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Follow up to Grace Blackwell's 661k dataset, for 2023☆156Jun 10, 2026Updated 3 months ago
- A grammar of graphics for comparative genomics☆782Sep 2, 2026Updated 2 weeks ago
- Align proteins to genomes with splicing and frameshift☆420Jan 5, 2026Updated 8 months ago
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆101Mar 12, 2026Updated 6 months ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆336Jul 22, 2026Updated 2 months ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆149Apr 13, 2026Updated 5 months ago
- Accurate metagenomic profiling && Fast large-scale sequence/genome searching☆222Apr 24, 2026Updated 4 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆681Aug 7, 2026Updated last month
- Fast Whole-Genome Similarity (ANI) Estimation☆482Sep 14, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An updated pipeline for pangenome investigation