mourisl / MSAplotLinks
Plot multiple sequence alignment (MSA)
☆15Updated last year
Alternatives and similar repositories for MSAplot
Users that are interested in MSAplot are comparing it to the libraries listed below
Sorting:
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆77Updated 4 months ago
- Pipeline to apply encoded Kmer analysis to protein sequences☆16Updated 2 months ago
- Python bindings for the TaxonKit library☆40Updated 4 months ago
- ☆19Updated 11 months ago
- Realtime base modification frequency tool☆12Updated last month
- Protein Sequence Annotation with Language Models☆24Updated 5 months ago
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆23Updated last year
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆20Updated 8 months ago
- Nanopore UMI-linked consensus sequencing☆16Updated 4 years ago
- ☆36Updated 3 months ago
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆36Updated 2 weeks ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Updated 9 months ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆53Updated 5 months ago
- ☆16Updated last month
- Generation and updating of protein families☆21Updated last week
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Detecting Sequence Signals in Targeting Peptides Using Deep Learning☆13Updated 6 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆13Updated last month
- Influenza genome analysis Nextflow workflow☆30Updated last month
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆15Updated 4 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- A genome browser in your Jupyter notebook☆31Updated 5 months ago
- Nail is an Alignment Inference tooL☆53Updated 2 weeks ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆56Updated 8 months ago
- MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences☆14Updated 3 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆57Updated 2 months ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago