seqeralabs / nf-chai
POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction
☆10Updated this week
Alternatives and similar repositories for nf-chai:
Users that are interested in nf-chai are comparing it to the libraries listed below
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆23Updated 9 months ago
- Metagenome analysis using the Kraken software suite☆30Updated 2 years ago
- BiG-MEx implementation as Docker images and R packages☆12Updated 2 years ago
- Universal and efficient core gene phylogeny with Foldseek and ProstT5☆45Updated this week
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆25Updated last year
- Nanopore UMI-linked consensus sequencing☆12Updated 3 years ago
- ☆30Updated 3 years ago
- From metagenomes to epitopes and beyond☆11Updated 3 weeks ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆28Updated 3 weeks ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 2 years ago
- Parse GFF3 into Pandas dataframes☆26Updated 10 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆11Updated 2 months ago
- Python bindings for the TaxonKit library☆33Updated 2 weeks ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 3 years ago
- FASSO: Functional Annotations using Sequence and Structure Orthology☆9Updated 2 years ago
- Variant catalogue pipeline☆25Updated this week
- Read, parse and operate different multiple input file formats with OpenVariant☆11Updated last month
- Nail is an Alignment Inference tooL☆43Updated this week
- Code and manual of the endoR R-package (Ruaud et al, in preparation).☆12Updated last year
- Bacterial Annotation by Learned Representation of Genes☆54Updated 3 years ago
- ☆23Updated last year
- Convert genbank files to a swath of other formats☆14Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated last year
- Find Unique genomic Regions☆29Updated last week
- ☆19Updated 2 years ago
- Protein Alignment and Detection Interface☆61Updated 9 months ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆16Updated 4 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆32Updated 4 months ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Updated 3 years ago