mlbendall / telescope_annotation_dbLinks
Transposable element databases
☆13Updated 3 years ago
Alternatives and similar repositories for telescope_annotation_db
Users that are interested in telescope_annotation_db are comparing it to the libraries listed below
Sorting:
- ☆20Updated 2 years ago
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 3 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- binned motif enrichment analysis and visualisation☆42Updated last week
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- ☆15Updated 2 years ago
- ☆13Updated 3 years ago
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆16Updated 3 weeks ago
- ☆34Updated 10 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Updated 3 years ago
- scover☆24Updated 2 years ago
- ☆26Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated last month
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆42Updated last year
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Updated 4 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- A toolkit for analyzing architectural stripes☆20Updated 11 months ago
- ☆23Updated 4 years ago
- ☆17Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆20Updated last week
- Use an ensemble of variant callers to call variants from ATAC-seq data☆23Updated 5 months ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago