mlbendall / telescope_annotation_dbLinks
Transposable element databases
☆13Updated 3 years ago
Alternatives and similar repositories for telescope_annotation_db
Users that are interested in telescope_annotation_db are comparing it to the libraries listed below
Sorting:
- binned motif enrichment analysis and visualisation☆40Updated last month
- ☆32Updated 5 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ☆28Updated 6 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 2 months ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Benchmarking long-read RNA-seq analysis tools☆27Updated 4 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- Motif manipulation functions for R.☆28Updated 2 months ago
- ☆17Updated 4 years ago
- ☆49Updated 10 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆27Updated 2 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 11 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated last year
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆11Updated last month
- ☆17Updated 2 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year
- ☆20Updated last year
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated last year
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆16Updated last year
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆19Updated 2 months ago