Transposable element databases
☆15Apr 7, 2022Updated 3 years ago
Alternatives and similar repositories for telescope_annotation_db
Users that are interested in telescope_annotation_db are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantification of transposable element expression using RNA-seq☆89Feb 8, 2024Updated 2 years ago
- RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…☆13Jul 13, 2016Updated 9 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆33Jun 12, 2024Updated last year
- ☆12May 14, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Everything but the kitchen sink☆13Feb 6, 2025Updated last year
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 4 months ago
- ☆10Jan 18, 2023Updated 3 years ago
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆12Apr 5, 2025Updated 11 months ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Dec 1, 2025Updated 3 months ago
- Genome Assembly 102☆17Apr 23, 2025Updated 11 months ago
- Course website for Genomic Data Visualization 2022☆16Dec 28, 2022Updated 3 years ago
- ☆16Sep 21, 2021Updated 4 years ago
- 🧲 Multi-step adaptive estimation for reducing false positive selection in sparse regressions☆13Jul 21, 2024Updated last year
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Default Bayesian hypothesis tests for correlation, partial correlation, and mediation☆11May 4, 2020Updated 5 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 7 months ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- Code used to generate a dataset quantifying multi-drug use in 80 million patients' prescription drugs claims☆10Sep 26, 2017Updated 8 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Apr 13, 2021Updated 4 years ago
- ☆10May 31, 2022Updated 3 years ago
- Awesome resources for biological engineering students compiled by the MIT Communication Lab☆23Apr 8, 2019Updated 6 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆46Jan 8, 2026Updated 2 months ago
- RNA sequence design for a target protein sequence☆13Mar 12, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)☆15May 1, 2025Updated 10 months ago
- ERVmap is one part curated database of human proviral ERV loci and one part a stringent algorithm to determine which ERVs are transcribed…☆26Sep 28, 2021Updated 4 years ago
- CancerMIRNome - an interactive analysis and visualization database for miRNome profiles of human cancer☆12Aug 9, 2024Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Mar 11, 2019Updated 7 years ago
- A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.☆53Updated this week
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- ☆14May 3, 2024Updated last year
- piano - An R/Bioconductor package for gene set analysis☆15Sep 13, 2022Updated 3 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆14Mar 15, 2023Updated 3 years ago
- Kdrew's scripts for handling protein complex map data☆14Jun 12, 2025Updated 9 months ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44May 11, 2017Updated 8 years ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆73Mar 16, 2026Updated last week
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆13Jan 10, 2024Updated 2 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago