grenaud / leeHomLinks
Bayesian reconstruction of ancient DNA fragments
☆30Updated last year
Alternatives and similar repositories for leeHom
Users that are interested in leeHom are comparing it to the libraries listed below
Sorting:
- ☆31Updated 6 years ago
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago
- Segmental Duplication Assembler (SDA).☆43Updated 2 years ago
- Visualising discordant reads☆15Updated 10 years ago
- Tools and Utilities for msmc and msmc2☆50Updated 2 weeks ago
- A module for improving the insertion sequences of structural variant calls☆33Updated 4 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- ☆44Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- Kmer Analysis of Pileups for Genotyping☆35Updated last week
- A repo contains historical and updated MTEC libraries.☆18Updated 6 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆29Updated last year
- R-package: Calculation of haplotype blocks and libraries☆35Updated 6 months ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Code for phasing SVs with SNPs☆53Updated 5 years ago
- ☆19Updated last year
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆18Updated 9 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Updated 5 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Genealogical Estimation of Variant Age (GEVA)☆32Updated 4 years ago
- Genome-wide scan for balancing selection using beta statistic☆32Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 6 years ago
- ☆51Updated last year