HelenaLC / muscat-comparisonLinks
☆12Updated last year
Alternatives and similar repositories for muscat-comparison
Users that are interested in muscat-comparison are comparing it to the libraries listed below
Sorting:
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Normalize CITEseq Data☆66Updated 3 months ago
- ☆29Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆41Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- ☆24Updated 2 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- Single-cell Case Control Analysis☆51Updated 9 months ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆41Updated 3 years ago
- Clone of the Bioconductor repository for the batchelor package.☆17Updated 4 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 3 months ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- Tools for assessing clustering robustness☆25Updated this week
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 6 years ago
- ☆25Updated 4 years ago