☆12May 14, 2024Updated 2 years ago
Alternatives and similar repositories for muscat-comparison
Users that are interested in muscat-comparison are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆25Feb 20, 2025Updated last year
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Multi-sample multi-group scRNA-seq analysis tools☆248Jul 6, 2026Updated 3 months ago
- R package for benchmarking single cell analysis methods☆34Oct 4, 2023Updated 3 years ago
- ☆66Aug 26, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆37Feb 28, 2022Updated 4 years ago
- An R framework for choosing clustering parameters in scRNA-seq analysis pipelines☆39Jun 12, 2020Updated 6 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Mar 15, 2023Updated 3 years ago
- R package for specialised analysis of single cell data☆42Oct 14, 2022Updated 4 years ago
- post-clustering differential expression test☆38May 28, 2019Updated 7 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆17Jan 4, 2021Updated 5 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 7 years ago
- ☆19Mar 11, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 6 years ago
- Transposable element databases☆19Apr 7, 2022Updated 4 years ago
- ☆15Mar 31, 2022Updated 4 years ago
- R toolbox for Archetypal Analysis and Pareto Task Inference on single cell data (based on ParTI)☆32Jul 27, 2020Updated 6 years ago
- Predicted cell-cell interactions of the aging mouse brain☆21Sep 24, 2019Updated 7 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- ☆20Mar 28, 2017Updated 9 years ago
- These are my contributions to the weekly #TidyTuesday challenges!☆11May 30, 2021Updated 5 years ago
- ☆44Apr 5, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Individual level Differential Expression Analysis for Single cells☆28Dec 24, 2022Updated 3 years ago
- Single-cell Orientation Tracing☆21Jan 23, 2022Updated 4 years ago
- scDataviz: single cell dataviz and downstream analyses☆68Sep 24, 2021Updated 5 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 5 years ago
- seqpac - A Framework for small RNA analysis in R using Sequence-Based Counts☆10Oct 12, 2026Updated 3 weeks ago
- Utilities repository to analyze single-cell data from https://www.nature.com/articles/s41467-018-07261-3.☆10Feb 7, 2020Updated 6 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆25Jul 6, 2023Updated 3 years ago
- ☆25Aug 5, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- twosigma☆10Jun 8, 2023Updated 3 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆54Dec 1, 2025Updated 11 months ago
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆29Jan 10, 2024Updated 2 years ago
- ☆10Dec 11, 2024Updated last year
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆45May 20, 2026Updated 5 months ago
- Solutions to the labs and exercises in ISL.☆11Jan 21, 2019Updated 7 years ago
- Analysis of single cell RNA-Seq data from Veres et al.☆14Dec 10, 2019Updated 6 years ago