HelenaLC / muscat-comparisonLinks
☆12Updated last year
Alternatives and similar repositories for muscat-comparison
Users that are interested in muscat-comparison are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- Normalize CITEseq Data☆66Updated 5 months ago
- ☆24Updated 3 months ago
- ☆42Updated 4 years ago
- R package for specialised analysis of single cell data☆39Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆42Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last week
- ConsensusTME Gene Sets and R Script☆39Updated last year
- An R package to analyze single-cell V(D)J data☆28Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Single-cell Case Control Analysis☆52Updated 2 weeks ago
- Clone identification from single-cell data☆61Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- ☆39Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- R package for Bioconductor submission☆37Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Clone of the Bioconductor repository for the batchelor package.☆17Updated 6 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago
- ☆55Updated 4 years ago
- ☆48Updated last year
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 3 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago