mjhubisz / argweaverLinks
Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
☆14Updated 2 years ago
Alternatives and similar repositories for argweaver
Users that are interested in argweaver are comparing it to the libraries listed below
Sorting:
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆57Updated 10 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14Updated 2 years ago
- ☆20Updated 5 years ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- machine learning applications for dadi☆16Updated 10 months ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Sweep Inference Framework (controlling for correlation)☆29Updated last year
- genotype dimensionality reduction with a VAE☆48Updated 9 months ago
- A set of tools for modelling ancestry patterns along the genome.☆23Updated this week
- Analysis of inference methods on standard population models☆25Updated 4 years ago
- ☆17Updated 10 years ago
- ☆44Updated 8 months ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated last month
- Population genetic simulations in R☆61Updated this week
- ☆30Updated 3 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- ☆65Updated 3 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Updated 6 years ago
- An R interface for the ADMIXTOOLS software☆34Updated 3 weeks ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 4 months ago
- Tools and Utilities for msmc and msmc2☆49Updated 4 months ago
- Fast inference of fine-scale recombination rates based on fused-LASSO☆53Updated 8 months ago
- Shiny apps for teaching Population Genetics☆66Updated 2 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆14Updated 2 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Updated 12 years ago
- R code to compute the Singleton Density Score (SDS)☆31Updated 9 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Updated last week
- A reimplementation of a classical PSMC method in python for educational purposes☆17Updated last year