Tools for describing and manipulating demographic models.
☆19Mar 30, 2026Updated 3 months ago
Alternatives and similar repositories for demes-python
Users that are interested in demes-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Jun 28, 2026Updated 3 weeks ago
- A library of standard population genetic models☆144Jun 17, 2026Updated last month
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- Infer a tree sequence from genetic variation data.☆65Jun 30, 2026Updated 3 weeks ago
- A set of tools for modelling ancestry patterns along the genome.☆24Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Drawing functions for Demes demographic models☆25Jun 22, 2026Updated 3 weeks ago
- Population genetic simulations in R☆64Jul 3, 2026Updated 2 weeks ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14May 1, 2023Updated 3 years ago
- [mu]tation [s]pectrum [h]istory [i]nference☆27Jan 9, 2025Updated last year
- Lecture Notes on Computational and Mathematical Population Genetics☆199May 5, 2021Updated 5 years ago
- Population-scale Ancestral Recombination Graph (ARG) library☆188Jul 6, 2026Updated 2 weeks ago
- Infer the age of ancestral nodes in a tree sequence.☆27Jun 30, 2026Updated 3 weeks ago
- machine learning applications for dadi☆17Jan 23, 2025Updated last year
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Simulate ARGs and genomic sequence data using population genetic models☆217Jun 30, 2026Updated 2 weeks ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- Run a command and report its process tree's CPU, memory, and I/O usage☆21Updated this week
- ☆14Dec 3, 2024Updated last year
- Sampling and inference of genealogies with recombination☆57Apr 10, 2026Updated 3 months ago
- A demo of the Python C API for CodeMonkeys☆20Jun 17, 2018Updated 8 years ago
- ggplot2 stat for echoing data☆13Mar 24, 2019Updated 7 years ago
- Stricter subset of dplyr☆13Dec 8, 2019Updated 6 years ago
- Faster multispecies coalescent inference using multilocus data☆15Aug 13, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14May 1, 2023Updated 3 years ago
- ☆15Jul 17, 2019Updated 7 years ago
- A toolbox for C++ devs wanting to build geospatial population genetics simulators !☆11May 4, 2025Updated last year
- predicting DFE and alpha from polymorphism data☆29Oct 4, 2018Updated 7 years ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 7 months ago
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆16Sep 26, 2017Updated 8 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- Dengue Data Hub☆14Jun 21, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- ☆99Jun 28, 2026Updated 3 weeks ago
- Haplotype and population structure inference using neural networks.☆30Dec 5, 2024Updated last year
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆35Jul 2, 2026Updated 2 weeks ago
- Scalable genetics toolkit☆279Mar 2, 2026Updated 4 months ago
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 7 years ago
- ☆11Dec 24, 2024Updated last year