☆105Jun 28, 2026Updated 4 months ago
Alternatives and similar repositories for admixtools
Users that are interested in admixtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Oct 19, 2023Updated 3 years ago
- Tools test whether admixture occurred and more☆237Jul 13, 2026Updated 3 months ago
- ☆52May 12, 2026Updated 5 months ago
- An R interface for the ADMIXTOOLS software☆39Oct 7, 2026Updated last month
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Eigen tools by Nick Patterson and Alkes Price lab☆208Jul 20, 2026Updated 3 months ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆193Dec 19, 2024Updated last year
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14May 1, 2023Updated 3 years ago
- Method for dating admixture in ancient DNA specimens☆34Jan 12, 2022Updated 4 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆26Sep 28, 2026Updated last month
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆50Mar 7, 2024Updated 2 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- Bayesian analysis of hybrids☆12Feb 19, 2019Updated 7 years ago
- ☆17May 30, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆16Aug 6, 2024Updated 2 years ago
- Automatically exported from code.google.com/p/densitree☆32Oct 1, 2026Updated last month
- SMC++ infers population history from whole-genome sequence data.☆178Jan 20, 2024Updated 2 years ago
- ☆24Jun 9, 2021Updated 5 years ago
- General tools for genomic analyses.☆400Mar 25, 2026Updated 7 months ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Oct 14, 2026Updated 3 weeks ago
- Fast analysis and visualization of latent clusters in population genetic data☆77Mar 29, 2022Updated 4 years ago
- Methods for examining PCA locally along the genome.☆91Aug 13, 2024Updated 2 years ago
- ☆57Feb 14, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Presentations from the course☆40Aug 28, 2023Updated 3 years ago
- The hap-ibd program detects identity-by-descent segments in phased genotype data.☆58Jun 11, 2024Updated 2 years ago
- Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style …☆184Apr 17, 2026Updated 6 months ago
- Infer demographic history with the Moran model☆52Jun 14, 2025Updated last year
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆18Updated this week
- Code repository for the HAYSTAC pipeline☆18Oct 25, 2024Updated 2 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- Tools for describing and manipulating demographic models.☆18Oct 31, 2026Updated last week
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆18Sep 19, 2020Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Software to call ROHs☆21Updated this week
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Apr 25, 2024Updated 2 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆25Aug 9, 2023Updated 3 years ago
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 4 years ago
- Fast, Accurate and Memory-Efficient Principal Component Analysis All in One For Large-scale Dataset☆56Oct 25, 2026Updated 2 weeks ago
- ☆12May 13, 2024Updated 2 years ago
- Population genetic simulations in R☆64Oct 30, 2026Updated last week