☆103Jun 28, 2026Updated 3 months ago
Alternatives and similar repositories for admixtools
Users that are interested in admixtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Oct 19, 2023Updated 2 years ago
- ☆52May 12, 2026Updated 5 months ago
- Tools test whether admixture occurred and more☆235Jul 13, 2026Updated 3 months ago
- An R interface for the ADMIXTOOLS software☆38Oct 7, 2026Updated last week
- Eigen tools by Nick Patterson and Alkes Price lab☆207Jul 20, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆192Dec 19, 2024Updated last year
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Updated this week
- Presentations from the course☆40Aug 28, 2023Updated 3 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- General tools for genomic analyses.☆396Mar 25, 2026Updated 6 months ago
- Infer demographic history with the Moran model☆52Jun 14, 2025Updated last year
- Fast, Accurate and Memory-Efficient Principal Component Analysis All in One For Large-scale Dataset☆55Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆18Sep 19, 2020Updated 6 years ago
- Method for dating admixture in ancient DNA specimens☆34Jan 12, 2022Updated 4 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆48Mar 7, 2024Updated 2 years ago
- Estimating Effective Migration Surfaces☆112Oct 28, 2023Updated 2 years ago
- Tools for describing and manipulating demographic models.☆18Aug 4, 2026Updated 2 months ago
- Population genetic simulations in R☆64Updated this week
- Software to call ROHs☆21Aug 26, 2026Updated last month
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 4 years ago
- principal components population genetics analysis on linux☆21Aug 29, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆25Aug 9, 2023Updated 3 years ago
- Automatically exported from code.google.com/p/densitree☆32Oct 1, 2026Updated 2 weeks ago
- Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style …☆182Apr 17, 2026Updated 6 months ago
- ☆20Oct 2, 2024Updated 2 years ago
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 7 years ago
- ☆24Jun 9, 2021Updated 5 years ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆16Aug 6, 2024Updated 2 years ago
- SMC++ infers population history from whole-genome sequence data.☆178Jan 20, 2024Updated 2 years ago
- ☆13Apr 30, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆16Aug 25, 2026Updated last month
- Fast analysis and visualization of latent clusters in population genetic data☆77Mar 29, 2022Updated 4 years ago
- A Hi-C scaffolding method☆22Dec 22, 2021Updated 4 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆39Mar 5, 2023Updated 3 years ago
- Module for analysing admixture graphs☆30Apr 30, 2018Updated 8 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Sep 13, 2019Updated 7 years ago
- Tools and Utilities for msmc and msmc2☆51Jan 23, 2026Updated 8 months ago