MesserLab / SLiM-ExtrasLinks
Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself
☆44Updated 3 months ago
Alternatives and similar repositories for SLiM-Extras
Users that are interested in SLiM-Extras are comparing it to the libraries listed below
Sorting:
- Population genetic simulations in R☆63Updated last week
- A framework for simulation-based inference in evolutionary biology☆28Updated 3 weeks ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆39Updated 2 years ago
- R package for pedigree inference based on SNP data☆28Updated last month
- initial commit☆26Updated 3 years ago
- method for modeling continuous and discrete population genetic structure☆38Updated 2 years ago
- ☆26Updated 4 years ago
- ☆30Updated 3 years ago
- The integrated Sequentially Markovian Coalescent☆15Updated 2 weeks ago
- deep learning prediction of geographic location from individual genome sequences☆52Updated last year
- An R interface for the ADMIXTOOLS software☆34Updated 2 months ago
- ☆31Updated last week
- Estimating Effective Migration Surfaces☆110Updated 2 years ago
- Shiny apps for teaching Population Genetics☆67Updated 3 years ago
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆88Updated 4 years ago
- ☆46Updated 10 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 6 months ago
- the hierfstat package☆25Updated last year
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 10 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆66Updated 2 weeks ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 3 months ago
- Population and Evolutionary Genetics Analysis System☆29Updated 2 months ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Methods for examining PCA locally along the genome.☆88Updated last year
- Fitting latent factor mixed models☆13Updated 5 years ago
- microhaplotype visualizer and analyzer☆20Updated 4 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- R Port of psmc☆17Updated 2 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago