Singh-Lab / Differential-Mutation-AnalysisLinks
Differential Mutation Analysis
☆11Updated 5 years ago
Alternatives and similar repositories for Differential-Mutation-Analysis
Users that are interested in Differential-Mutation-Analysis are comparing it to the libraries listed below
Sorting:
- Comprehensive Human Expressed SequenceS☆18Updated last month
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- ☆25Updated 4 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Updated 7 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆38Updated last year
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆12Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- ☆12Updated 3 months ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Updated last year
- Visualization tool for temporal clonal evolution.☆17Updated 5 years ago
- Bedfile perturbation tool☆17Updated last year
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ☆12Updated last year
- Toolkit for benchmarking fusion transcript predictions☆19Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Clonal reconstruction from HTS data☆10Updated 3 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆22Updated 3 years ago
- ☆12Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Updated 4 years ago
- ☆22Updated 6 months ago
- Explore the cancer relevance of your gene list☆51Updated 6 months ago
- Multi-sample cancer phylogeny reconstruction☆35Updated 7 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago