bredelings / BAli-PhyLinks
Bayesian co-estimation of phylogenies and multiple alignments via MCMC
☆48Updated last week
Alternatives and similar repositories for BAli-Phy
Users that are interested in BAli-Phy are comparing it to the libraries listed below
Sorting:
- ☆68Updated 2 years ago
- Inference of population structure from time-series genotype data☆15Updated 6 years ago
- Explore and analyze biological sequence data☆17Updated last year
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- ☆50Updated 2 weeks ago
- A versatile simulation engine for stochastic population dynamics models.☆23Updated 3 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆23Updated 2 weeks ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 3 weeks ago
- Estimate node ages of a phylogeny by approximating the phylogenetic likelihood with a multivariate normal distribution.☆11Updated 5 months ago
- initial commit☆26Updated 2 years ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI☆50Updated 5 years ago
- ☆22Updated 4 years ago
- Automatically exported from code.google.com/p/macs☆17Updated 6 years ago
- A forward-time simulator for gene sequences modeling a variety of mutation and selection processes.☆20Updated 2 years ago
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆75Updated this week
- guix packages for bioinformatics software☆23Updated last year
- Visualize and perform a multitude of operations on newick files☆16Updated 3 years ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆57Updated 10 years ago
- Method for dating admixture in ancient DNA specimens☆28Updated 3 years ago
- Bonsai: Fast, flexible taxonomic analysis and classification☆71Updated last year
- software for UCE (and general) phylogenomics☆85Updated 8 months ago
- genotype dimensionality reduction with a VAE☆47Updated 8 months ago
- Population genetic simulations in R 🌍☆61Updated last week
- A flexible processor for sequencing reads☆15Updated 3 weeks ago
- Program for estimating dN/dS in overlapping genes (OLGs)☆14Updated 2 years ago
- De Bruijn graph representation in low memory☆35Updated last year
- Tutorial on Bayesian phylogenetic analysis☆51Updated 8 years ago
- A phylogeny dating method using least-squares algorithms and criteria☆29Updated last year
- NGLess: NGS with less work☆151Updated 8 months ago