minoda-lab / universcLinks
UniverSC: a flexible cross-platform single-cell data processing pipeline
☆46Updated last year
Alternatives and similar repositories for universc
Users that are interested in universc are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- ☆39Updated 4 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated 2 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated 2 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆79Updated 3 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- ☆55Updated 4 years ago
- ☆32Updated 7 months ago
- ☆59Updated 11 months ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated last week
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 2 months ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆56Updated 4 years ago
- ☆41Updated 2 months ago
- Demultiplexing pooled scRNA-seq data with or without genotype reference☆87Updated 4 months ago
- Pan-Cancer Single Cell Classifier☆75Updated last year
- ☆23Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆87Updated last month
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆49Updated last year
- Using TCR and expression for sequence embedding☆58Updated last week
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆84Updated 11 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- ☆22Updated 5 years ago
- ☆61Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 5 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆27Updated last year