☆100Jul 9, 2026Updated last month
Alternatives and similar repositories for dayhoff
Users that are interested in dayhoff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆24Sep 5, 2025Updated 11 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 3 months ago
- Potts model-based protein sequence design☆109Jul 1, 2026Updated last month
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 5 months ago
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆122May 10, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆31Dec 12, 2024Updated last year
- ☆42Mar 30, 2025Updated last year
- ☆148May 18, 2026Updated 2 months ago
- Phyla: Towards a Foundation Model for Phylogenetic Inference☆29Nov 20, 2025Updated 8 months ago
- Profluent-E1 family of Protein Encoder Models☆114Mar 11, 2026Updated 4 months ago
- ☆258Feb 12, 2026Updated 5 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆145Nov 11, 2025Updated 8 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆64Jul 14, 2026Updated 3 weeks ago
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆212May 15, 2026Updated 2 months ago
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- ☆81Jun 10, 2026Updated last month
- ☆50Jan 27, 2026Updated 6 months ago
- Extension of ThermoMPNN for double mutant predictions☆64Mar 23, 2026Updated 4 months ago
- A generalized computational framework for biomolecular modeling.☆439Updated this week
- Fast deep learning methods for large-scale protein-protein interaction screening☆133Aug 3, 2025Updated last year
- ☆174Jul 24, 2026Updated 2 weeks ago
- Public Release of ProGen3 family of Models☆114Jul 21, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated 11 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆227Jun 23, 2026Updated last month
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆263Mar 26, 2026Updated 4 months ago
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆127Apr 23, 2026Updated 3 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 11 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆270Jul 24, 2025Updated last year
- Inference code for RFdiffusion2☆438Apr 3, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆84Jun 1, 2026Updated 2 months ago
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆211May 13, 2026Updated 2 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆63Apr 29, 2025Updated last year
- Structural Quality Assessment for Biomolecular Structure Prediction Models☆98Updated this week
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated 2 years ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year