Alternatives and similar repositories for genesis

Users that are interested in genesis are comparing it to the libraries listed below

• rdilip / kanzi
  ☆21Updated last month
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• Gleghorn-Lab / DSM
  Protein representation and design under a single training scheme
  ☆22Updated last month
• flagshippioneering / pi-rldif
  Code for RL-DIF
  ☆16Updated 4 months ago
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆22Updated last month
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆18Updated last year
• ai4protein / VenusX
  ☆14Updated last month
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆23Updated 11 months ago
• zzhangzzhang / pLMs-interpretability
  ☆30Updated last year
• deskk / AbGPT
  ☆11Updated last year
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆22Updated 2 years ago
• barricklab-at-jhu / SVD-of-MSAs
  This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…
  ☆11Updated last year
• flagshippioneering / flash_ipa
  [NeurIPS 2025 spotlight] Efficient factorized variant of the IPA module.
  ☆34Updated last month
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated last week
• HannesStark / CodonMPNN
  ☆28Updated 10 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆44Updated last month
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated last year
• BioinfoMachineLearning / GCPNet
  A geometry-complete SE(3)-equivariant perceptron network (GCPNet) for 3D graphs. (Bioinformatics)
  ☆49Updated 6 months ago
• instadeepai / AbBFN2
  AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks
  ☆35Updated 5 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• LDeng0205 / StaB-ddG
  Predicting mutational effects on protein binding from folding energy. ICML 2025.
  ☆32Updated 3 months ago
• lehner-lab / domainome
  ☆15Updated 11 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 7 months ago
• Graylab / MaskedProteinEnT
  ☆12Updated 11 months ago
• SimonKitSangChu / EsmTherm
  ☆13Updated last year
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated 7 months ago
• Profluent-Internships / MMDiff
  Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion
  ☆58Updated last year
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆45Updated last week
• smiles724 / PeptideDesign
  ☆30Updated 4 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated last year