bouralab / DeepUrfoldLinks
Explore protein fold space with deep generative models
☆16Updated last year
Alternatives and similar repositories for DeepUrfold
Users that are interested in DeepUrfold are comparing it to the libraries listed below
Sorting:
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆37Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆30Updated last year
- Code for deep learning guided design of dynamic proteins☆30Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- ☆36Updated last year
- Some scripts that I keep using over and over.☆19Updated last month
- ☆28Updated 6 months ago
- Kuhlman Lab Installation of AlphaFold3☆29Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- ☆13Updated 4 months ago
- Fragment binding prediction with ColabFold☆35Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 2 months ago
- ☆13Updated 2 years ago
- ☆26Updated last week
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆19Updated 8 months ago
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆16Updated last week
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆18Updated 5 months ago
- ☆38Updated 10 months ago
- ☆25Updated 2 years ago
- Tutorial files☆11Updated last year
- Machine learning prediction of enzyme optimum pH☆44Updated 3 months ago
- A Unified Approach to Protein Engineering☆42Updated last year
- An accurate and efficient protein sequence design approach☆24Updated 4 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆15Updated 7 months ago
- Generative diverse protein backbones by protein language model☆32Updated 8 months ago
- ☆28Updated 7 months ago
- ☆19Updated 2 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago