AlphaFast: ultra-high-throughput AlphaFold3 inference with MMSeqs2-GPU
☆167May 4, 2026Updated 4 months ago
Alternatives and similar repositories for alphafast
Users that are interested in alphafast are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆136May 10, 2026Updated 4 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆272Jan 3, 2026Updated 8 months ago
- An Open-source Drug Discovery Engine☆487Sep 2, 2026Updated 2 weeks ago
- ☆55May 29, 2026Updated 3 months ago
- User friendly and accurate binder design pipeline☆1,228Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- composite-objective protein design☆370Updated this week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 7 months ago
- Inference code for RFdiffusion2☆445Apr 3, 2026Updated 5 months ago
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 6 months ago
- A fully open source biomolecular structure prediction model based on AlphaFold3☆876Updated this week
- BoltzGen: Toward Universal Binder Design☆1,060May 28, 2026Updated 3 months ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆436Updated this week
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆2,060Updated this week
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆230Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆342Jul 1, 2026Updated 2 months ago
- ☆60Aug 19, 2026Updated last month
- ☆259Sep 15, 2026Updated last week
- ☆147Jun 16, 2026Updated 3 months ago
- This repository enables inference and sampling for Dyno Psi-1, a de novo miniprotein binder design model.☆24Aug 25, 2026Updated 3 weeks ago
- A generalized computational framework for biomolecular modeling.☆447Aug 20, 2026Updated last month
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆275Jul 24, 2025Updated last year
- ☆54Apr 23, 2026Updated 4 months ago
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆217May 13, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- de novo design of high affinity biological binders☆202Sep 1, 2026Updated 3 weeks ago
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆968Sep 8, 2026Updated 2 weeks ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆310Sep 23, 2025Updated 11 months ago
- Fast and Interpretable Protein Substructure Alignment via Optimal Transport (ICLR 2026)☆27Jun 26, 2026Updated 2 months ago
- a lightweight distogram-prediction model trained via contrastive learning☆15May 3, 2026Updated 4 months ago
- Official repository of PXDesign☆263Dec 31, 2025Updated 8 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆92Sep 10, 2026Updated last week
- Consolidated repository to perform RLXF☆49Sep 14, 2026Updated last week
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 7 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆154May 18, 2026Updated 4 months ago
- Energy-guided binder design pipeline built on BindCraft☆19Jun 6, 2025Updated last year
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆878Updated this week
- ☆635Feb 6, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆140Jan 27, 2026Updated 7 months ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆91Jun 1, 2026Updated 3 months ago
- ☆2,972Updated this week