Alternatives and similar repositories for interprot

Users that are interested in interprot are comparing it to the libraries listed below

• pengzhangzhi / faplm
  FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models
  ☆151Updated last month
• prescient-design / lobster
  Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
  ☆133Updated this week
• Bitbol-Lab / ProtMamba-ssm
  ProtMamba: a homology-aware but alignment-free protein state space model
  ☆78Updated 3 months ago
• prescient-design / cortex
  A Modular Architecture for Deep Learning Systems
  ☆45Updated 3 months ago
• adaptyvbio / egfr_competition_1
  This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.
  ☆34Updated 9 months ago
• hgbrian / biomodals
  bioinformatics tools running on modal
  ☆96Updated 2 months ago
• google-deepmind / nuclease_design
  ML-guided enzyme engineering
  ☆68Updated last month
• AbSciBio / unlocking-de-novo-antibody-design
  ☆123Updated last year
• RosettaCommons / atomworks
  A generalized computational framework for biomolecular modeling.
  ☆240Updated this week
• DrLeucine / how_to_create_a_protein
  A short course on proteins and protein design aimed at early career students
  ☆157Updated last year
• RomeroLab / RLXF
  Consolidated repository to perform RLXF
  ☆34Updated 4 months ago
• OpenBioML / protein-lm-scaling
  ☆58Updated last year
• microsoft / protein-transfer
  ☆26Updated last year
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆138Updated 5 months ago
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆89Updated last year
• amyxlu / plaid
  All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins
  ☆112Updated 3 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆79Updated last year
• ElanaPearl / InterPLM
  Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders
  ☆193Updated last week
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆116Updated 2 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆46Updated 5 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆118Updated 6 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated last year
• chandar-lab / AMPLIFY
  ☆114Updated 2 months ago
• AI4PDLab / ProtRL
  ☆85Updated 3 weeks ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 5 months ago
• Exscientia / abodybuilder3
  ☆68Updated 10 months ago
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆160Updated 2 years ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 3 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆105Updated last month
• whitead / minimalaf
  Minimal AlphaFold
  ☆53Updated last year