medema-group / BiG-SCAPE
Similarity networks of biosynthetic gene clusters
☆97Updated this week
Alternatives and similar repositories for BiG-SCAPE:
Users that are interested in BiG-SCAPE are comparing it to the libraries listed below
- MGnify genome analysis pipeline☆104Updated this week
- Find clustered hits from a BLAST search☆111Updated 2 months ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆78Updated 3 months ago
- Supporting code for uncultivated gut virus manuscript☆68Updated last year
- Bioinformatics tool for Locus Visualisation☆85Updated 2 weeks ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆67Updated last month
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆130Updated last week
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆86Updated last year
- CLI tool to annotate genes with KOfam☆75Updated last year
- Pipeline for metabolic annotation of microbial genomes☆142Updated 7 months ago
- ☆40Updated this week
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆57Updated 2 months ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆31Updated 11 months ago
- Systematic search of all known anti-phage systems.☆88Updated 2 weeks ago
- Open-source usearch☆107Updated 8 months ago
- Phage Annotation using Protein Structures☆96Updated last week
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆133Updated 2 months ago
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆180Updated 7 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆33Updated 5 years ago
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆115Updated last year
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆99Updated last year
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆53Updated 6 months ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆60Updated 5 months ago
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes☆133Updated 2 months ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆183Updated 7 months ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆73Updated 5 months ago
- ☆62Updated last month
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆82Updated 2 weeks ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆139Updated 3 weeks ago
- (Meta-)genome screening for functional and natural product gene sequences☆79Updated this week