☆22Apr 20, 2026Updated 6 months ago
Alternatives and similar repositories for gator-gc
Users that are interested in gator-gc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A workflow and scripts for large-scale antiSMASH analyses☆53Apr 3, 2025Updated last year
- Convert genbank files to a swath of other formats☆32Aug 9, 2026Updated 2 months ago
- ☆15Jul 4, 2023Updated 3 years ago
- a python package for automated generation of phylogenetic trees from genbank files☆24Apr 9, 2026Updated 6 months ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆16May 24, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Lightweight bioinformatics pipeline for microbial genome recovery☆18Oct 23, 2025Updated last year
- Repository to track changes in MIBiG curation data stored in JSON format☆11Mar 18, 2024Updated 2 years ago
- Similarity networks of biosynthetic gene clusters☆182Oct 5, 2026Updated 3 weeks ago
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆34Jun 10, 2026Updated 4 months ago
- Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins☆15Dec 7, 2021Updated 4 years ago
- Curso: Bases para la inferencia filogenética, construcción, lectura e interpretación de árboles filogenéticos, 27 agosto-26 septiembre 20…☆12Oct 4, 2024Updated 2 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆33Jan 5, 2025Updated last year
- ☆14Dec 19, 2025Updated 10 months ago
- Pangenome Analysis in Prokaryotes Lesson☆13Aug 20, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated last year
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated 11 months ago
- A simple template repository for python projects☆11Nov 2, 2023Updated 2 years ago
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 7 years ago
- Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico.☆14Sep 28, 2026Updated last month
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆73Aug 27, 2026Updated 2 months ago
- a simple tool for listing conda environments with descriptions☆16Mar 28, 2025Updated last year
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Aug 28, 2026Updated 2 months ago
- ☆27Jun 20, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bioinformatic Tools for study Evolution of metabolic diversity☆42Feb 27, 2024Updated 2 years ago
- ☆15Jun 23, 2026Updated 4 months ago
- Find clustered hits from a BLAST search☆153Aug 6, 2026Updated 2 months ago
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆67Aug 28, 2026Updated 2 months ago
- lsaBGC - suite for pan-BGC-omics analysis☆23Nov 21, 2025Updated 11 months ago
- FUGAsseM: Function predictor of Uncharacterized Gene products by Assessing high-dimensional community data in Microbiomes☆21Dec 26, 2025Updated 10 months ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆31Jan 15, 2026Updated 9 months ago
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- ☆20Jul 12, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Want to make a neighbourhood-scale synteny plot? Have too many genomic neighbourhoods? SyntenyQC may help!☆12May 17, 2026Updated 5 months ago
- 🌟🧬 GraphBin-Tk: assembly graph-based metagenomic binning toolkit☆24Jun 25, 2026Updated 4 months ago
- Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes☆56Sep 1, 2026Updated last month
- Fast and space-efficient taxonomic classification of long reads☆47Jul 16, 2026Updated 3 months ago
- Assembling phage particles one protein at a time☆26Aug 3, 2026Updated 2 months ago
- ☆86Aug 23, 2026Updated 2 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆32Jul 21, 2026Updated 3 months ago