Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases
☆26Nov 9, 2022Updated 3 years ago
Alternatives and similar repositories for synthaser
Users that are interested in synthaser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Sep 27, 2024Updated last year
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- UFCG: Universal Fungal Core Genes☆36Jul 29, 2025Updated last year
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆91Mar 12, 2026Updated 4 months ago
- Similarity networks of biosynthetic gene clusters☆180Apr 1, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆19Mar 20, 2025Updated last year
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated 10 months ago
- Find clustered hits from a BLAST search☆147Updated this week
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 7 months ago
- ☆31Oct 26, 2021Updated 4 years ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆55May 16, 2026Updated 2 months ago
- lsaBGC - suite for pan-BGC-omics analysis☆23Nov 21, 2025Updated 8 months ago
- annotation base on snakemake☆12May 29, 2024Updated 2 years ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆29Jan 15, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fungal Validation and Identification Pipeline☆14Jul 13, 2026Updated 3 weeks ago
- Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.☆51Apr 2, 2025Updated last year
- motus - a tool for marker gene-based OTU (mOTU) profiling☆180Jul 17, 2026Updated 3 weeks ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆260May 13, 2026Updated 2 months ago
- The Biosynthetic Gene cluster Meta’omics abundance Profiler (BiG-MAP). A command-line tool that is able to profile the abundance and expr…☆35Jan 27, 2026Updated 6 months ago
- ☆12Dec 10, 2024Updated last year
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆31Mar 28, 2019Updated 7 years ago
- BGC Detection and Classification Using Deep Learning☆159Nov 11, 2023Updated 2 years ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆102Aug 11, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Discovery of conserved gene clusters in multiple genomes☆135Jan 16, 2026Updated 6 months ago
- Chimera: An easy to use pipeline for Genome based Metabolic Network reconstruction, evaluation and visualization.☆20Oct 21, 2022Updated 3 years ago
- Modeling gene duplication, loss, and coalescence (through parsimony)☆10Jun 18, 2020Updated 6 years ago
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆223Updated this week
- ☆20Jul 12, 2023Updated 3 years ago
- Identify and remove contaminants from metagenome-assembled genomes☆18Feb 16, 2024Updated 2 years ago
- Better Alignments with Translated HMMER☆27Jul 25, 2026Updated 2 weeks ago
- HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes☆69May 9, 2026Updated 3 months ago
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆13Jan 14, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- ELECTOR: EvaLuator of Error Correction Tools for lOng Reads☆15May 27, 2021Updated 5 years ago
- Mycotools is a compilation of computational biology tools and database (MycotoolsDB/MTDB) software that facilitate large-scale comparativ…☆17Jul 26, 2026Updated 2 weeks ago
- Calculate fastq reads and sequencing coverage☆15Oct 20, 2020Updated 5 years ago
- Gene cluster comparison figure generator☆653Dec 22, 2025Updated 7 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆30Jul 21, 2026Updated 2 weeks ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆42Feb 27, 2024Updated 2 years ago