Alternatives and similar repositories for corason:

Users that are interested in corason are comparing it to the libraries listed below

• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 5 months ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆33Updated 3 weeks ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 2 years ago
• kelwyres / Bactabolize
  ☆37Updated last month
• EBI-Metagenomics / mettannotator
  ☆57Updated 3 weeks ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆51Updated last month
• Finn-Lab / SanntiS
  SMBGC Annotation using Neural Networks Trained on Interpro Signatures
  ☆23Updated 9 months ago
• BackofenLab / CRISPRidentify
  ☆26Updated 3 weeks ago
• EBI-Metagenomics / EukCC
  Tool to estimate genome quality of microbial eukaryotes
  ☆35Updated this week
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆28Updated last year
• ohlab / GRiD
  Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …
  ☆32Updated 4 years ago
• cultivarium / GenomeSPOT
  Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome
  ☆40Updated 2 weeks ago
• deprekate / PHANOTATE
  PHANOTATE: a tool to annotate phage genomes.
  ☆71Updated last month
• pereiramemo / BiG-MEx
  BiG-MEx implementation as Docker images and R packages
  ☆12Updated 2 years ago
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆37Updated 3 months ago
• functional-dark-side / agnostos-wf
  ☆44Updated last year
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆60Updated 2 months ago
• bhattlab / lathe
  A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing
  ☆69Updated 3 years ago
• adamhockenberry / bacphlip
  A python library for predicting phage lifestyle based on genome sequence
  ☆35Updated last year
• Gibbons-Lab / pipelines
  Pipelines used in the lab.
  ☆11Updated 3 months ago
• iquasere / KEGGCharter
  A tool for representing genomic potential and transcriptomic expression into KEGG pathways
  ☆53Updated 5 months ago
• raw-lab / MetaCerberus
  Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…
  ☆53Updated 3 weeks ago
• moshi4 / ANIclustermap
  A tool for drawing ANI clustermap between all-vs-all microbial genomes
  ☆71Updated 4 months ago
• AnantharamanLab / PropagAtE
  Prophage Activity Estimator
  ☆26Updated 7 months ago
• susiegriggo / Phynteny
  Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny
  ☆43Updated last month
• SWittouck / SCARAP
  A toolkit for prokaryotic comparative genomics
  ☆38Updated 2 months ago
• takaram / kofam_scan
  CLI tool to annotate genes with KOfam
  ☆73Updated last year
• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆31Updated 2 years ago
• xiaoli-dong / metaerg
  ☆42Updated 3 years ago
• xinehc / melon
  Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes
  ☆34Updated last month