Alternatives and similar repositories for BiG-MAP:

Users that are interested in BiG-MAP are comparing it to the libraries listed below

• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 2 weeks ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆39Updated last month
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆40Updated 6 months ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆59Updated last week
• shenwei356 / gtdb-taxdump
  GTDB taxonomy taxdump files with trackable TaxIds
  ☆53Updated last week
• steineggerlab / ufcg
  UFCG: Universal Fungal Core Genes
  ☆32Updated 3 months ago
• HubertTang / PLASMe
  ☆26Updated last year
• SWittouck / SCARAP
  A toolkit for prokaryotic comparative genomics
  ☆48Updated 3 months ago
• apcamargo / ictv-mmseqs2-protein-database
  ☆31Updated 2 months ago
• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆34Updated 3 years ago
• EBI-Metagenomics / EukCC
  Tool to estimate genome quality of microbial eukaryotes
  ☆37Updated 3 months ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 3 years ago
• snayfach / UHGV
  Unified Human Gut Virome Catalog
  ☆31Updated 9 months ago
• snayfach / MAGpurify
  Improvement of metagenome-assembled genomes
  ☆52Updated 5 years ago
• ablab / metaGT
  Pipeline for metagenome and metatranscriptome joint assembly
  ☆21Updated 2 years ago
• Matteopaluh / KEMET
  KEGG Module Evaluation Tool
  ☆29Updated last year
• gatech-genemark / MetaGeneMark-2
  MetaGeneMark-2: Improved Gene Prediction in Metagenomes
  ☆21Updated last year
• arumugamlab / msamtools
  Metagenomics-related extended functionalities to samtools
  ☆21Updated last year
• EBI-Metagenomics / mettannotator
  ☆70Updated last week
• NBChub / bgcflow
  Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)
  ☆40Updated 4 months ago
• brinkmanlab / islandpath
  IslandPath standalone software
  ☆32Updated last year
• raw-lab / MetaCerberus
  Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…
  ☆57Updated 3 weeks ago
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆29Updated last year
• ziyewang / MetaBinner
  ☆53Updated last year
• RasmussenLab / phamb
  Downstream processing of VAMB binning for Viral Elucidation
  ☆49Updated 10 months ago
• allind / EukDetect
  ☆50Updated last year
• ziyewang / COMEBin
  ☆52Updated last year
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆33Updated last year
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆65Updated 6 months ago
• mtisza1 / Cenote-Taker3
  Discover and annotate the virome
  ☆42Updated 3 weeks ago