medema-group / BiG-MAP
☆29Updated last week
Alternatives and similar repositories for BiG-MAP:
Users that are interested in BiG-MAP are comparing it to the libraries listed below
- A workflow and scripts for large-scale antiSMASH analyses☆37Updated 3 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated this week
- Bioinformatic Tools for study Evolution of metabolic diversity☆31Updated last year
- KEGG Module Evaluation Tool☆29Updated last year
- ☆29Updated last month
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆19Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆38Updated 5 months ago
- Unified Human Gut Virome Catalog☆27Updated 8 months ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆41Updated 3 months ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆33Updated last month
- Downstream processing of VAMB binning for Viral Elucidation☆48Updated 8 months ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆33Updated 3 years ago
- Tool to estimate genome quality of microbial eukaryotes☆37Updated last month
- A python library for predicting phage lifestyle based on genome sequence☆36Updated last year
- Prophage Activity Estimator☆26Updated 9 months ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated 2 years ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆58Updated last month
- ☆45Updated last year
- Improvement of metagenome-assembled genomes☆50Updated 5 years ago
- ☆26Updated 11 months ago
- ☆52Updated last year
- ☆15Updated last year
- Local version of the virus identification and analysis web server (tool set)☆44Updated 2 weeks ago
- This program is designed for annotation of antimicrobal resistance(AMR), transposon(Tn) and integron(In) in bacteria.☆20Updated last year
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆26Updated last week
- Pipeline for major biological analyses.☆34Updated 2 years ago
- Pipelines used in the lab.☆12Updated 5 months ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- GTDB taxonomy taxdump files with trackable TaxIds☆52Updated 11 months ago
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆23Updated last month