The Biosynthetic Gene cluster Meta’omics abundance Profiler (BiG-MAP). A command-line tool that is able to profile the abundance and expression of a collection of gene clusters across metagenomic and metatranscriptomic data from any kind of biome, including human, plant, animal, marine, and soil microbiomes.
☆35Jan 27, 2026Updated 9 months ago
Alternatives and similar repositories for BiG-MAP
Users that are interested in BiG-MAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆106Oct 15, 2026Updated 2 weeks ago
- Similarity networks of biosynthetic gene clusters☆182Oct 5, 2026Updated 3 weeks ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated last year
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆32Jul 21, 2026Updated 3 months ago
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- GEne Cluster prediction with COnditional random fields.☆90Jul 29, 2026Updated 3 months ago
- Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases☆26Nov 9, 2022Updated 3 years ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Oct 4, 2021Updated 5 years ago
- ☆19Mar 20, 2025Updated last year
- Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico.☆14Sep 28, 2026Updated last month
- antiSMASH☆271Updated this week
- Bioinformatic Tools for study Evolution of metabolic diversity☆42Feb 27, 2024Updated 2 years ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆31Jan 15, 2026Updated 9 months ago
- lsaBGC - suite for pan-BGC-omics analysis☆23Nov 21, 2025Updated 11 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Jun 13, 2026Updated 4 months ago
- BGC Detection and Classification Using Deep Learning☆161Nov 11, 2023Updated 2 years ago
- Find clustered hits from a BLAST search☆153Aug 6, 2026Updated 2 months ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆55May 16, 2026Updated 5 months ago
- ☆12Dec 10, 2024Updated last year
- Comparative Metatranscriptomics Workflow☆10Jul 9, 2020Updated 6 years ago
- Find Co-Abundant Groups of Genes☆12Aug 3, 2020Updated 6 years ago
- Systematic search of all known anti-phage systems.☆188Sep 1, 2026Updated last month
- A user-friendly tool to screen antimicrobial resistance in fungal genomes☆21May 8, 2026Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆47Feb 17, 2023Updated 3 years ago
- Reaction Analysis through Imaging of Chemical Units☆17Dec 5, 2025Updated 10 months ago
- Genome mining tool for novel RiPP BGCs☆16Jul 6, 2023Updated 3 years ago
- Identify and remove contaminants from metagenome-assembled genomes☆18Feb 16, 2024Updated 2 years ago
- An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within micro…☆274May 13, 2026Updated 5 months ago
- Python package to study microbial communities using metabolic modeling.☆140Updated this week
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆107Oct 19, 2026Updated last week
- Reorients assembled microbial sequences☆145Jun 30, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆66Sep 1, 2026Updated last month
- Repository to track changes in MIBiG curation data stored in JSON format☆11Mar 18, 2024Updated 2 years ago
- Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes☆197Sep 8, 2026Updated last month
- Fast Species Tree Inference☆11Aug 17, 2026Updated 2 months ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆78Aug 13, 2026Updated 2 months ago
- AMBER: Assessment of Metagenome BinnERs☆34Jun 23, 2026Updated 4 months ago
- Autometa: Automated Extraction of Genomes from Shotgun Metagenomes☆45Jan 24, 2025Updated last year